Oryx dammah (scimitar-horned oryx): 120866050
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Entry
120866050 CDS
T07255
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03020
RNA polymerase
oda03420
Nucleotide excision repair
oda05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120866050 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
120866050 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
120866050 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oda03021
]
120866050 (POLR2A)
03400 DNA repair and recombination proteins [BR:
oda03400
]
120866050 (POLR2A)
Enzymes [BR:
oda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120866050 (POLR2A)
Transcription machinery [BR:
oda03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
120866050 (POLR2A)
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120866050 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
120866050
NCBI-ProteinID:
XP_040099421
LinkDB
All DBs
Position
Unknown
AA seq
1963 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN
YSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS
SPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKY
SPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTS
PTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDEN
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggagtcctcagtccggatgaactgaagcgaatgtctgtgacagagggcggc
atcaaatacccagagacgaccgagggaggccgccccaagctcggggggctgatggatccg
aggcagggggtgattgagaggacgggccgctgccaaacctgtgcaggaaacatgacagag
tgtcctggccactttggtcacattgagctggccaagcctgtgttccacgttggcttcctg
gtcaagactatgaaagttttgcgctgtgtctgcttcttctgctccaagttgcttgtggac
tctaacaacccgaaaatcaaggacatcttggctaagtccaaggggcagcccaagaagcgg
ctcacacatgtctatgacctctgcaaggggaaaaacatctgcgagggcggggaggagatg
gacaacaagtttggtgtggagcagcctgagggcgatgaagatttgaccaaagaaaagggc
cacggtggctgcggtcggtaccagccccggatccggcgctccggcctggagctatatgca
gaatggaagcatgtcaatgaggactctcaagagaagaagatcctgttgagccccgagcgg
gtgcatgagatcttcaagcgcatctccgacgaggagtgctttgtcctgggcatggagccg
cgctacgcccggcctgagtggatgattgtcaccgtgctgcccgtgcccccgctctccgtg
cggcccgctgtcgtgatgcagggctctgcccgcaaccaggacgacctgacccacaaactg
gccgacattgtcaagatcaacaatcagcttcggcgcaatgagcagaacggcgcagctgcc
catgtcatcgctgaggacgtgaagctcctccagttccacgtggccaccatggtggacaat
gagctgcctggcttgcctcgtgccatgcagaagtctgggcgtcccctcaagtccctgaag
cagcgattgaaggggaaggaaggccgtgtgcgtgggaacctgatgggcaagcgtgtggac
ttctcagcccgcactgtcatcacccccgaccccaacctctccattgaccaggtcggcgtg
ccacgctccattgccgccaacatgacctttgcggagatcgtcacccccttcaacattgac
agacttcaggaactagtgcgcagggggaacagccagtacccgggagccaagtacatcatc
cgggacaacggtgatcgcattgacctgcgtttccaccccaagcccagtgaccttcacctg
cagactggctacaaggtggaacggcacatgtgtgatggggacattgttatcttcaaccgg
cagccaactttgcacaaaatgtccatgatgggtcatcgggttcgcatcctgccctggtcc
acttttcgcttgaatcttagcgtgacaactccatacaatgctgacttcgacggggatgag
atgaacttacacctgccgcagtccctggagacgcgggctgagatccaggagctggccatg
gtgccacgcatgattgtcaccccccagagcaatcgtccggtcatgggcattgtgcaggac
acattgactgcagtgcgcaaatttaccaagagggatgtcttcctggagcggggggaggtg
atgaacctcctgatgttcttgtccacgtgggatgggaaggtcccacagccagccatcctg
aagccccggcccctgtggacggggaagcagatcttctccctcatcatacccggccacatc
aactgtatccgcacccatagcacccaccccgatgatgaggacagcggcccttacaagcac
atctctcccggggatactaaggtggtggtggagaatggcgagctgatcatgggcatcttg
tgtaagaagtctctgggcacgtcggccggctccctggtccacatctcttaccttgagatg
ggtcacgacatcactcgcctcttctactccaacattcagactgtcatcaacaactggctc
ctcattgaaggtcataccattggcattggggactccatcgctgattctaagacttaccaa
gacattcagaacactattaagaaggccaagcaggatgtaatagaggtcattgagaaggca
cataacaatgagctggagcccacgccagggaacaccctgcggcagacatttgagaaccag
gtgaaccgcattctcaacgatgcccgagacaagaccggctcctccgcccagaaatcactg
tctgaatacaacaactttaagtctatggtcgtgtctggggccaaaggttccaagatcaac
atctcccaggtcattgctgtcgtcgggcagcagaacgtggagggcaagcggatcccattt
ggattcaagcaccggaccctgcctcacttcatcaaagatgactatgggcctgagagccga
ggctttgtggagaactcctacctggccggcctcacgcccaccgagttcttcttccatgcc
atggggggccgtgaggggctgatcgacacagctgtcaagactgctgagactgggtacatc
cagcggcggctgataaagtccatggagtcggtgatggtgaagtacgacgccaccgtgcgc
aactccatcaatcaggtggtgcagctgcgctatggcgaggatggcctggcgggcgagagt
gtcgagttccagaatctggccaccctcaagccttccaacaaggcttttgagaagaagttc
cgctttgattacaccaatgagagggccctgcggcgcaccctgcaggaagacctagtgaag
gatgtgctgagcaacgcacacattcagaatgagctagaacgagaatttgagcggatgcgt
gaggaccgggaggtgctcagagtcatcttcccaactggcgacagcaaggttgtcctcccc
tgcaaccttctgcgcatgatctggaacgctcagaagatcttccacatcaaccctcgcctt
ccctctgacctgcaccccatcaaggtggtagagggcgtcaaggagttgagcaagaagctg
gtgattgtgaatggggacgaccccctgagccggcaggcccaggagaacgccaccttgctc
tttaacatccacctgcggtccacgctgtgttctcgccgcatggccgaggagttccggctc
agtggagaggctttcgactggctgcttggagagatcgagtccaagttcaaccaagccatt
gcccatccgggggaaatggtgggagctctggctgcacagtccctcggagaacctgccacc
cagatgaccttgaacaccttccactatgctggtgtgtcggccaagaacgtgactctgggt
gtgccccgacttaaggagctcatcaacatttccaagaagccaaagaccccctcacttacc
gtcttcctactgggccagtctgctcgagatgcggagagagccaaggatattctgtgccgc
ttggaacacacaacattgaggaaggtgaccgccaacacggccatctactatgaccccaac
ccccagagcacagtggtggccgaggatcaggagtgggtgaatgtctactatgagatgcct
gactttgatgtggcccgaatctccccctggcttttgcgggtggagctggaccggaagcac
atgactgaccggaagctgaccatggagcagattgccgaaaagatcaacgctggtttcggt
gacgacttgaattgcatctttaacgatgataacgcagagaagctggtgctccggatccgc
atcatgaacagtgatgaaaacaagatgcaagaggaggaagaggtggtggacaagatggac
gacgacgtcttcctgcgctgcatcgagtccaacatgctgacggacatgaccctgcagggc
atagagcagatcagcaaggtgtacatgcacttgccgcagaccgacaacaagaagaagatc
atcatcacagaggacggggagttcaaggccctgcaggagtggatcctggagacggacggc
gtgagcctgatgcgcgtgctgagtgagaaggatgtggaccctgtgcgcaccacatccaac
gacatcgtggagatcttcacggtgctgggcattgaggccgtacggaaggccctggagcgg
gagctgtaccacgtcatctccttcgacggctcctacgtcaattaccggcacttggctctc
ctgtgtgacaccatgacctgtcgtggccacttgatggccatcactcgccacggagtcaac
cgccaggacactggacctctcatgaagtgctcctttgaggaaacggtggacgtgctcatg
gaagcagctgcgcacggagagagtgaccccatgaagggggtgtccgagaacatcatgctg
ggccagctggctccggctggcaccggctgttttgacctcctgctcgatgcagagaagtgc
aagtacggcatggagatccccaccaatatccccggcctgggggctgccggacccaccggc
atgttcttcggctcggcccccagtcccatgggaggaatttctccagccatgacaccctgg
aaccagggtgcaaccccagcctacggcgcctggtcccccagtgttgggagtgggatgacc
ccgggagcagcaggcttctctcccagtgctgcctcagacgccagcgggttcagccctggc
tattccccggcctggtctcccacaccaggctccccgggctccccaggcccctcaagcccg
tatatcccctcaccagggggtgccatgtctcccagctactccccgacatcacctgcctat
gagccccgctcccctggaggctacacaccccagagtccctcttactcccccacttcccct
tcctactcccctacttctccatcctactctccaaccagccccaactacagccccacgtca
cccagctactcacccacttctcccagctactcacccacgtctcccagctattcacccacg
tctcccagctactcgcccacttcccccagctactctcccacatcacctagctactctccc
acctcgcccagctactctcccacctcgcccagttactcgcccacctcgcccagctactcg
cccacctcgcccagctactcgcccacttcgcccagctactcaccgacatctccaagctat
tcaccaacatcgccaagctactctccaacttctccaagttactcacccactagtcctaac
tattctccaaccagtcccaattacaccccgacgtcacccagctatagcccaacgtcacca
agttactcacctactagtcccaactacacaccaacaagccccaactacagcccaacctct
ccaagctactctccaacttcacccagctactccccaacctcgccaagctactctccttca
agcccgcgatacacaccacagtctcccacctacacccccagctcgcccagctacagcccc
agctcgcccagctacagcccgacttcaccaaagtacaccccaaccagtccttcctatagc
cccagctcaccagagtacacccccacctcccccaagtactcacctaccagccccaaatat
tcacccacctcccccaagtactcacctaccagccctacctactcacccaccaccccgaaa
tactcacccacatcgcctacttactcaccaacctctcctgtctacaccccaacctccccc
aagtattcacccaccagccccacctactcccccacctcccccaagtactcacccaccagc
cccacctactcccccacctcccccaaaggctctacttactcgcccacctcccccggctac
tcgcccaccagccctacctatagcctcactagtccagccatcagcccggatgacagtgat
gacgagaactga
DBGET
integrated database retrieval system
