Oryx dammah (scimitar-horned oryx): 120871488
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Entry
120871488 CDS
T07255
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oda01002
]
120871488 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oda04121
]
120871488 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oda04147
]
120871488 (USP13)
Enzymes [BR:
oda01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120871488 (USP13)
Peptidases and inhibitors [BR:
oda01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120871488 (USP13)
Ubiquitin system [BR:
oda04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120871488 (USP13)
Exosome [BR:
oda04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120871488 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_3
Motif
Other DBs
NCBI-GeneID:
120871488
NCBI-ProteinID:
XP_040107363
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MQRRGALFGMPGGSGSRKMAAGDIGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRGASGGALPKRRNSKIFLDL
DTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSG
GNGHALEHYRDTGYPLAVKLGTITPDGADVYSFQEEEAVLDPHLAKHLAHFGIDMLHMHG
TENGLQDNDIKPRVSEWEVIQETGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEF
QRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQ
QNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEER
IQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAESNRRPLPELVRAKIP
FSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFD
VSIDMPDLLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMTQLIDPSDIDESSVMQ
LAEMGFPLEACRKAVYFTGNMGAEVAFNWIVVHMEEPDFAEPLTMPGYGGAASAGASVFG
ATGLDNQPPEESVAIITSMGFHRNQAIQALRATNSNLERALDWIFSHPEFEEDSDFVIEM
ENNANANIVSEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDH
KVCASERPPKDLGYMYFYRRIPS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcggcatgccgggcggcagcggcagcaggaagatggct
gcaggagacatcggcgagctgctagtgccccacatgcccaccatccgcgtgccccggtcc
ggggacagggtctacaagaacgagtgcgccttctcctacgactccccgaattctgaaggc
ggactctatgtatgcatgaatacatttttggcctttggaagggaacacgtggaaagacac
tttcgaaaaactggacagagtgtctacatgcacctgaagagacacgtgcgtgagaaggta
agaggcgcatctggtggcgctctacccaaaaggaggaattccaagatttttttagatcta
gatactgatgacgatttaaatagcgacgattatgaatatgaagatgaagccaaacttgtt
atattcccagaccactatgaaatagccctaccaaatattgaggagttaccagccctggta
acaattgcttgtgatgcagttctcagctcaaaatctccatacagaaagcaggacccagat
acatgggagaatgaattgccagtgtcgaaatatgccaataacctcacccagttggacaat
ggagtcagaattcctccaagtggttggaagtgtgccaggtgtgaccttcgcgagaacctc
tggctgaacctgactgatggctccgtgctgtgtgggaagtggttctttgacagctccggg
ggcaacgggcatgcgttggaacattacagagacacaggctaccctctcgctgtaaaactg
gggaccatcactccggatggggctgatgtttattctttccaagaagaggaagctgttttg
gaccctcatttggccaagcatttagcacattttggaattgacatgcttcatatgcatggg
acagagaatgggctccaggacaacgacatcaagccacgggtcagcgagtgggaggtgatc
caggagacggggacaaagctgaagcccatgtacggcccagggtacacagggctcaagaac
ctgggcaatagctgctatctcagctctgtgatgcaggccatcttcagcatcccagaattc
cagagagcgtatgtaggaaatcttccaagaatatttgactactctcctttagatccaacg
caagatttcaacacacagatgactaagttaggacatggccttctctcaggccagtattca
aaacctcccgtgaagtctgagctcattgaacaggtgatgaaggaggagcacaagcctcaa
cagaatgggatctccccacgcatgtttaaggcctttgtgagcaagagccacccggaattc
tcctccaacagacagcaggatgcccaggagtttttcctgcacctcgtgaatctagtagag
aggaaccgcattggctcggaaaacccaagtgatgtttttcggtttttggtggaagagcgg
attcagtgctgtcagacccgaaaagtccgctacacggagagggtggactacctgatgcaa
ttacctgtggccatggaggcggcaaccaacaaagatgaactgattgcctatgaactaaca
agaagggaagcagaatcaaacagaagaccccttcctgagttggttcgtgccaagatacca
ttcagtgcctgcctgcaggccttttctgaaccagaaaatgttgatgatttctggagcagc
gccctgcaagcaaagtctgcgggtgtgaaaacatctcgctttgcctcattccctgaatac
ttggtagtgcagataaagaagttcacttttggtcttgactgggttcccaaaaaatttgat
gtttctattgatatgccagacctacttgatatcaaccatctccgagccagggggttgcag
ccaggagaggaggaacttccagacatcagcccccccatagtgattcctgatgactctaaa
gatcgcctgatgacccaactgatagacccatcagatattgatgagtcttcagtgatgcag
ctggctgagatgggcttccctctagaagcgtgtcggaaggctgtgtattttactggaaat
atgggagccgaggtggccttcaactggatcgttgttcacatggaagagccagattttgct
gaaccgctgaccatgcctggttatggaggagcagcttctgctggggcctctgtttttggt
gctactggattggataaccaacctccggaagaaagtgtagctatcattacctccatggga
ttccatcgaaatcaggctattcaggccctgcgagcaacgaatagtaacctggaaagagca
ctggattggatctttagccatcctgagtttgaggaagacagtgactttgtaatcgagatg
gagaataatgccaatgcgaacatcgtttctgaggccaaacccgaaggacctagagtcaag
gatggatctggaatgtacgaattatttgcgttcatcagtcacatgggaacgtctacaatg
agtggccactacgtctgtcacattaaaaaggaaggaagatgggtgatctacaatgaccac
aaagtgtgtgcctcggaaaggccccctaaagacctgggctacatgtacttttatcgcagg
ataccaagctaa
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