Oryx dammah (scimitar-horned oryx): 120879616
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Entry
120879616 CDS
T07255
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03022
Basal transcription factors
oda03420
Nucleotide excision repair
oda05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120879616
09124 Replication and repair
03420 Nucleotide excision repair
120879616
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
120879616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oda03021
]
120879616
03400 DNA repair and recombination proteins [BR:
oda03400
]
120879616
Transcription machinery [BR:
oda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120879616
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120879616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
VWA_3
Motif
Other DBs
NCBI-GeneID:
120879616
NCBI-ProteinID:
XP_040118604
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MTFLQYVRNKMDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHH
GQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTK
SKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLII
FSSLTTCDPSNIYDLIKTLKAAKIRVSIIGLSAEVRVCTALARETGGTYHVILDESHYKE
LLTHHVSPPPASSNSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSSTEPGLTLGGYF
CPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEHNGERFCYACQG
ELKDQHVYVCSVCQNAFCVDCDVFVHDSLHCCPGCIHKIPVPSGI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacttttttacaatatgtaaggaacaaaatggatgaagagcctgaaagaactaagcga
tgggaaggaggctatgaaagaacatgggagattcttaaagaagatgaatcaggatcactt
aaagctacaattgaagacattctcttcaaagcgaagagaaaaagggtatttgagcaccat
ggacaagttcgacttggaatgatgcgccatctatatgtggtagtagatggatcaagaaca
atggaagaccaagatttaaagccaaatagactgacatgtacattaaagttgctggaatac
ttcgtagaggaatattttgatcaaaatcctattagtcagattggaataattgtaacaaag
agtaaaagagctgaaaaactgactgaactctcaggaaatccacggaaacatataacatct
ttgaagaaagctgtagatatgacttgccatggagaaccatctctttataactccttaagc
atggctatgcagactctaaaacacatgccgggacatacaagtagagaagtcctaatcatc
tttagcagcctcacaacctgtgatccctctaacatctatgatttaattaagaccctaaag
gcggctaaaatcagagtgtctattattggattgtctgcagaggttcgagtatgcactgca
cttgctcgtgaaactggtggcacgtaccatgttattttagatgaaagccattacaaagaa
ttgttaacacatcatgttagtcctcctcctgctagctcaaattctgaatgctcacttatt
cgaatgggatttcctcagcataccattgcttctctgtctgaccaagatgcaaaaccctct
ttcagcatggcgcacctggatagcagcactgagccaggacttacattaggaggctatttc
tgcccacagtgtcgggcaaagtactgtgagcttcctgttgaatgtaaaatctgtggtctt
actttggtgtctgctccccacttagcacggtcttaccatcatttatttcctttggatgct
tttcaagaaattcccctagaagaacataatggagaaaggttttgttatgcctgtcagggg
gaattgaaagaccaacatgtctatgtttgcagtgtctgccagaatgcgttctgtgtggac
tgtgatgtttttgttcatgactctcttcattgttgtcctggctgtattcataagattcca
gttccttcgggtatttga
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