Oryx dammah (scimitar-horned oryx): 120883261
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Entry
120883261 CDS
T07255
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
120883261 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oda03400
]
120883261 (LIG4)
Enzymes [BR:
oda01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
120883261 (LIG4)
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
120883261 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
120883261
NCBI-ProteinID:
XP_040123221
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKAFLDSWRNFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKEIMLAKLYVELLNLPRDGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLSIQQVNDILDSIASNNSAKRKDLMKKSVLQLITQSSA
LEQKWLIRMIVKDLKLGFSQHTIFSVFHSDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYED
QFGASPQEGSLTPFIHNAFRTDVLNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSEL
QTCYCVFDVLMVNDKKLGHETLRKRFEILNSVFTPVPGRIEIVQKTQAHTKKEVIDALNE
AIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGARGGMM
SHFLCAVAEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHRKAPPSNILC
GTEKPEVYIEPCNSVIVQVKATEIVPSDMYKTGCTLRFPRIEKIREDKEWYECTSLEDLE
QLRGKACGKLASKHLYMSGDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNVNRVSTVFE
DVEFCVMSGTSNHPKPDLENRIAELGGYIVQNPGPDTYCVIAGSDNIRVKNIISSDKHDV
VKPEWLLECFRTRSCVPWQPRFMIHMCPSTKQHFAQEYDQYGDSYFVDTDLHQLKEVFSG
IKNAGEQTPGEMSPVIADLEHRYSWASIPLSMFRHHTVYLDLYAVVNDLSTRIKGARLAI
TALELRFHGAQVVSYLAEGVSHVIVGEDQSRVADLKAIRRTLKRKFKILQERWVTVSIDK
CELQEENQYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacctcacagactgttgcatctcacgttccttttgcagatttatgt
tcgactttagaacgaatacagaaaagtaaagggcgtgcagaaaaaatcagacacttcaaa
gcgtttttagattcttggagaaactttcatgatgcccttcataagaaccaaaaagatgtc
acagattctttttatccagccatgagacttattcttcctcagctggaaagggagagaatg
gcctatggaatcaaagaaattatgctggctaagctttatgttgaattgcttaacttgcct
cgagatggaaaagatgcccttaagcttttgaactacagaacaccgacaggaacccgtgga
gatgctggagactttgcaatgattgcgtactttgtattgaaacccagatgtctacagaaa
ggaagcctaagcattcagcaagtaaatgacattttagactccattgccagcaataattct
gccaaaaggaaagacctaatgaagaaaagtgttcttcagcttataactcagagttcagca
cttgaacaaaagtggctgatacggatgattgttaaggacctaaagcttggcttcagtcag
cacactatattttctgtttttcacagtgatgctgctgagttgcataatgtcaccacagat
ctggagaaggtctgtaggcaactgcacgatccttcagtgggactcagtgacatttccatc
accttattctctgcctttaaacccatgctggccgctatagcagatatcgagcggattgag
aaggacatgaaacaccagagtttctacattgaaaccaagctggacggagagcggatgcag
atgcacaaggatggggatgtgtaccggtacttctctcgcaatgggtataactatgaggac
cagtttggtgcttccccacaggaagggtccctcacacccttcattcataatgcattcaga
acagatgtgctgaactgtatccttgacggtgagatgatggcctacaaccctaacacccag
acttttatgcaaaaggggaataagtttgatattaaaagaatggtagaagattctgagctg
cagacttgttactgtgtttttgatgtattgatggttaatgataaaaagctaggacatgag
accctgagaaagaggtttgaaattcttaatagtgttttcacacctgtaccaggtagaata
gaaatagtgcagaaaacacaagctcatactaagaaagaagtaattgatgctttgaatgaa
gcgatagataaaagagaagaggggatcatggtgaaacacccgctgtccatttacaagccg
gataaaagaggtgaagggtggttaaaaattaaaccagagtatgtcagtggactgatggat
gagctggacatcttaatcgtcgggggctactgggggaagggtgcccggggtgggatgatg
tctcattttttgtgcgctgtggcagagaagcccccttctggtgaaaaaccctcagtgttt
cacactctctgccgcgtgggctcgggttacactatgaaagaactgtatgacctgggtttg
aagttggccaaacactggaagccttttcataggaaagccccaccaagcaacattctgtgt
ggaacagagaagccagaggtctacatcgagccttgcaattcagtcattgttcaggttaag
gccacagagatcgtccccagtgacatgtataaaaccggctgcacgttgcgttttccacgg
attgagaaaataagagaagacaaagaatggtacgaatgtacatccctggaggacttagag
caacttcgagggaaggcctgtggaaagctcgcgtccaaacacctttacatgagtggcgat
gatgaaccacaagagaaaaagcggaaagctgccccaaagatgaagaaagtcattggaatt
attgagcacctaaaagctcccaacctttctaacgtaaacagggtttctactgtgtttgaa
gacgtggagttttgtgtcatgagtggaaccagcaaccatcccaagcctgacctggagaac
agaattgccgaattgggtggttacatagtacagaacccgggtccagacacgtactgtgtg
atcgcagggtctgacaacattcgagtgaagaatatcatctcttcagataaacatgatgtc
gtcaagccagagtggctgctagagtgttttaggaccagaagctgtgtgccctggcaacct
cgcttcatgatccacatgtgcccgtcgacaaagcaacactttgcccaggaatatgaccaa
tacggggatagttactttgtcgacacagatttgcaccaactgaaggaagtgttttcggga
attaaaaatgctggtgagcagactcctggggagatgagtcctgtgattgctgatttggaa
cacaggtattcctgggccagcatacctcttagcatgtttagacaccacactgtttatttg
gacttgtacgctgtcgtcaatgacttaagtaccagaatcaagggagctaggttagccatc
acagccttggagcttcgatttcatggagcacaagtagtttcctatttagctgagggagtc
tctcacgtcattgttggggaggatcagagtcgggttgcagacttgaaagctattcgaagg
actcttaagaggaaatttaaaatcttacaagaacgttgggtcactgtttcaatagacaag
tgtgaattacaggaggaaaatcagtatttggtttga
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