Orrella daihaiensis: DHf2319_08220
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Entry
DHf2319_08220 CDS
T08894
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
odh
Orrella daihaiensis
Brite
KEGG Orthology (KO) [BR:
odh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
odh03009
]
DHf2319_08220
Enzymes [BR:
odh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DHf2319_08220
Ribosome biogenesis [BR:
odh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DHf2319_08220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Hva1_TUDOR
Motif
Other DBs
NCBI-ProteinID:
UOD51628
LinkDB
All DBs
Position
complement(1727579..1729072)
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AA seq
497 aa
AA seq
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MPTDKTEIGHTQQDGSASETSTRPKKSKSSKVRAPFRRRRAPVVQAAEQDDAATEARSAN
QSELVSDGPMVEEDTPATALNYLEQTPKTAQRLGKYLQSELLMPKLHKVLAQAGIGSRRD
MEELIIAGRVSVNGEPAHIGQRVSTSDVVRVNGKPVNRNASKKPPRVVLYHKPAGEIVSH
DDPAGRATVFSRLPRIKTGKWLSVGRLDLNTEGLLILTTSGDLANRLMHPRYGNEREYAV
RVLGDLSDEIRLKLIEGVELDDGVARFGSVEFLGGEGSNRWYRVTLQEGRNREVRRIFES
VGLTVSRLIRTRFGEIVLPNNLRRGRWEELSGDLVNALLVQVGLLKDEDDDSVKRGARGR
QAKQPVSHDSALPPGFGGQKKAAPATGRHRGQSGKPRNGKAAGSPDPLVTSVMTVTGGFA
NGHPGAVSAGRRGKGSSAPGNQPVGKHQARKGAPKPGKPGSSKGRSQRSGSGPRRDDDWQ
PSGAKAHESRLGFLKNR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgataagacagagattggccacacacagcaagacggttcggcgtctgagacg
tcgacgcgccctaaaaaatcaaaatccagtaaggtgcgagcaccatttcggcggcgccgc
gcaccagtggtgcaggccgcagagcaggatgatgctgcaactgaggcaagatccgcaaat
cagtcagagcttgtttctgacggaccgatggtggaggaggatactccagccaccgctctg
aattatctcgaacagactccaaaaactgcacaacggctcggtaagtacttgcaaagtgaa
ctactgatgccaaagctgcacaaggttcttgctcaggctggcatcgggtcacgtcgagat
atggaggagctgatcatcgctggccgcgtctcggtcaatggtgaacctgctcatatcggt
caacgcgtaagcacatcagatgtggttcgggttaacggcaaaccagttaaccgcaacgct
agcaaaaagccgcctcgagtcgtgctctatcacaaacctgcgggtgaaattgttagtcat
gacgatccagccgggcgagccacggtgttttcaaggttaccgcgcatcaaaactggaaag
tggctttcagtgggtcgactcgacctaaatactgaaggcttgttgatactgaccacgtca
ggcgacctggctaatcgactcatgcacccgcgttatgggaacgagcgtgaatatgcagtg
cgtgttctaggtgatttgagtgatgaaatccgattgaagttgatagaaggcgtcgagcta
gatgacggtgtagcccgttttggtagcgttgaattccttggtggcgagggcagcaatcga
tggtatcgggtcacgctgcaagagggtagaaatcgcgaagtgcgccgaattttcgagtca
gtgggtttgacagttagccgtttgattcggactcggtttggcgagatcgttctgccaaat
aacttgaggcgggggcgctgggaagagctgagcggtgacttggtgaatgccttgttggtt
caagtgggtttgctaaaagacgaggacgacgacagcgtaaaacgtggtgcccggggtcgg
caagctaagcagccagttagccatgacagtgctttgcctccaggtttcggtggtcagaaa
aaagcggcaccggcgaccggtcgtcatcgagggcaatctggcaagccccgcaacggcaaa
gcagcaggtagtcctgatccgctggtgacctctgtgatgaccgtgacaggcggatttgct
aatggccatccaggagctgtatcagcgggccgcaggggtaagggatcctcagccccggga
aatcaaccggttggtaagcatcaagcgcgcaaaggggccccaaagcctggtaagccaggt
tcgagtaaggggcgcagtcaacgcagcggatccggtccgcgacgcgacgatgattggcaa
ccatctggcgctaaagcccatgagtcacgactagggtttttgaagaaccgctaa
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