Orrella dioscoreae: ODI_R2647
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Entry
ODI_R2647 CDS
T05133
Name
(GenBank) putative sigma-54-dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
odi
Orrella dioscoreae
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
odi03000
]
ODI_R2647
Transcription factors [BR:
odi03000
]
Prokaryotic type
Helix-turn-helix
Other families
ODI_R2647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
HTH_30
AAA_5
PAS_4
HTH_29
PAS_8
HTH_23
HTH_1
HTH_IclR
AAA_2
Mg_chelatase
PAS
HTH_28
AAA
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
SOE50328
UniProt:
A0A1C3JZH1
LinkDB
All DBs
Position
I:2860324..2862273
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AA seq
649 aa
AA seq
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MDGLPLPGTRHALAAATPPALIRRSWARCAQWADDLPDDPVALGRGDLDARHEQHASMLR
AAQPEIDTLASLVASASSLVLLADASGVILQATGNTDFLRRADRVALRPGVSWAENHRGT
NAIGTALAEAAPLCVHGAEHFLPRNQILSCHAAPIRSPRGDILGVLDISGDAQRLHAYAL
GLATLCARQVANRLMLHAGPRCQQLVFHHQAGMLETADRGLLLIEDGRVVGANDAALALL
RTDWRRLLDQPVERWLPAWRTLPASPAPLRGHDGQALFALLRQPAGTPVWTRAQADTPAS
PKPPGPATPAPAQPTRAPVVRTDLLPPLDPALETRFTRSRRALDAGLAVLLQGETGAGKE
VYARHLHQASRWHAGPLVAVNCGALPDTLIEAELFGYEAGAYTGARRQGARGRLREADGG
ILFLDEIGDMPLTLQTRLLRVLQERTVQPLGAGRAVPVEFGLVSASNRDLAAMVETGAFR
ADLYYRLQDCRVDLPPLRSRADLRAHVCTTLRACAAPAAPPTLDDGALAQLARYPWPGNY
RQLQAVLRGLALFHPPGSLIRVGDLPEEIQACRPATAHHAQDASSSSQAAPAPDIAAHAT
LRSQQSQQISEALARHGGNISRAARDLGIHRSTLHRHLARPGMPGPIHR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggatggcttgccattgcctggaacgcggcacgcgcttgcggccgccaccccgcccgcc
ctcatccggcgttcctgggcgcgctgcgcgcaatgggcggacgacctgcccgacgacccg
gtggccctgggccgcggcgacctcgatgcccgccacgagcagcacgccagcatgctgcgc
gccgcccagcccgagatcgacacgctggccagcctcgtcgccagcgcctccagcctggtg
ttgctggccgatgccagcggcgtcatcctgcaggccacgggcaataccgacttcctgcgc
cgcgccgaccgcgtggcgctgcggcccggcgtcagctgggccgaaaaccaccggggcacc
aatgccatcggcacggcgctggcggaagccgcgccgctgtgcgtgcatggcgccgagcac
ttcttgccgcgcaaccagatactgagctgccatgccgcgcccatccgctcgccgcgtggc
gacatcctgggcgtgctggacatctccggcgacgcgcagcggctgcatgcctatgcgctg
ggcctggcaacgctgtgcgcgcggcaggtcgcgaatcgcctcatgctgcacgccggcccg
cgttgccagcaattggtcttccaccaccaggccggcatgctggaaaccgccgaccggggc
ctgctgctgatcgaggatggccgtgtcgtgggcgcgaacgacgcggcgctggcgctgctg
cggaccgactggcgccgtttgctggaccagcccgtcgagcgctggctgcccgcctggcgc
accctgcccgcctcgcccgcccccttgcggggccatgacggccaggccttgtttgcgctg
ctgcgccagcctgccggcacgccggtctggacccgcgcccaagcggacacgcccgcctcg
cccaagccacctggccctgccacgcctgcccctgcccagccgacgcgcgcaccggtagtg
cgcaccgacctgctgccaccgctggacccggcgctggagacacgcttcacgcgcagccgc
cgtgcgctggatgccggcctggccgtgctgctgcaaggggaaaccggcgcgggcaaggag
gtatatgcccgccatctgcaccaggccagccgctggcatgcgggcccgctcgtggcagtg
aattgcggtgcgctgcccgataccctgatcgaggcggaactgttcggctatgaggccggc
gcctacaccggcgcccgccgccagggtgcgcgcggccggctgcgggaagcggacggcggc
atcctgttcctggacgagatcggcgacatgccgctgacgctgcagacgcggctgctgcgc
gtcctgcaggaacgcacggtccagccgctgggcgcgggccgcgccgtgcccgtggaattc
gggctggtcagcgccagcaaccgcgacctggcggcgatggtggaaacaggcgcgtttcgc
gcggacctgtattaccggctgcaggactgccgcgtcgacctgcctcccttgcgttcgcgt
gcagacctgcgcgcccatgtgtgcacgaccctgcgcgcctgcgccgcgcccgctgcgccg
cccaccctggacgacggcgccctggcgcaactggctcgctatccgtggccgggtaattac
cggcaattgcaggcggtgctgcgcggcctggcgctcttccatccgccgggcagcctgatc
cgggtcggcgacctgcccgaggagatacaggcatgccggccagccaccgcccatcatgcc
caggacgcttcgtcctcctcccaggccgccccggcgccagacatcgccgcgcacgccacc
ttgcgcagccagcaaagccagcagatcagcgaggccctggcgcgccacggcggcaacatc
agccgcgcggcgcgcgacctgggcatccaccgcagcaccctgcaccgtcacctggctcgc
cccggcatgcctgggccgatccatcgatag
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