Orrella dioscoreae: ODI_R2798
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Entry
ODI_R2798 CDS
T05133
Name
(GenBank) RND efflux system, inner membrane transporter CmeB
KO
K18138
multidrug efflux pump
Organism
odi
Orrella dioscoreae
Pathway
odi01501
beta-Lactam resistance
odi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ODI_R2798
01503 Cationic antimicrobial peptide (CAMP) resistance
ODI_R2798
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
odi02000
]
ODI_R2798
01504 Antimicrobial resistance genes [BR:
odi01504
]
ODI_R2798
Transporters [BR:
odi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ODI_R2798
Antimicrobial resistance genes [BR:
odi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ODI_R2798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Patched
SecD_SecF
OAD_gamma
Motif
Other DBs
NCBI-ProteinID:
SOE50559
UniProt:
A0A1C3JZY3
LinkDB
All DBs
Position
I:complement(3040170..3043388)
Genome browser
AA seq
1072 aa
AA seq
DB search
MPQFFIDRPIFAWVVALFITLAGLLAIPNMPVAQYPDVAPPAIQITATYPGASAEDVAEQ
VTSIIENELNGAKGLLYYESVSDSNGQAQITVTFRPGTDPDMAQVDVQNRVSNISAQLPT
AVTQQGLTFEQTSAGFLMIGAVSSVDGSMDQIALADYITRNIKNPVSRVPGVGRFQLFAA
PRAMRIWVDPNKLVAYNLSMADVNQAISQQNAQIPAGQLGAPPNLDATRTTATVMVNGQL
SSVDAFGAVVLRANQDGSMVRLRDVARVEVGADNYQFGARLNGQPTAAFAIVLAPNANAL
ATAQGVRDQMEELSAFFPGGVEYSIPYDTAPYVQVSIEQVLHTLAEAMVLVFLVMYLFLQ
NVRYTIIPTLVVPVALLGALGVMLALGFSINVLTMFAMVLAIGILVDDAIVVVENVERIM
VEDGLSPREATAKAMPQISGAIVGITLVLTSVFLPLAFMGGSVGVIYRQFSVAMAVSIMF
SGFLALTFTPALCVTLLKAIPKGHHEQKKGFFGWFNRKFEAGTNRYQNVVSRLVHRSGRM
MIIYLILVIALGWLYFRLPTSFLPEEDQGYTITNIELPSGSSANRTMEVIEDVEKYFMDL
PTTENVISVRGFSFNGSGLNAALIFAPMKDFSERKGEGGSAQAVSFGAMQKLLMGTRDAM
VITVIPPAISSLGNASGFDFRLQDRGGAGAEALAQATADLMGLAMKSDVLGDIRITGLGP
GQQLSLTIDREKAAALGVDFNEAATLLSTSVGSAFLGKFPNLGWMQNVWVQADAAYRMDL
KDVLRLNARNAQGNMVPLSSFVSYEWGEGPSQVVRYNSYPSMRLEGGAAPGYSSGAAMAE
MERLMQQMPPGFGYEWNGLSYQEKQAGDQALILMGLAMLVVFMVLAALYESWAIPLSVML
VVPLGMLGAVGLVTLTGMSNDVYFQVGMVTVIGLAAKNAILIIEFAKDAYARGAGLYEAA
IEAARLRLRPILMTSLAFILGVVPLVLASGAGAASQNAVGVGVIGGMLAATPFSVIFVPV
FFVAVLGLFKTKPRLLGAEAKAHAQEQAEKQRLEAAQQGGDQKNHPDHEGKA
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaatttttcatcgatagaccaatctttgcctgggtggtcgccctgttcatcacg
ctggctggcctgctggcgataccgaacatgccggtcgcccagtatccggacgtggcgccg
cccgcgatccagatcacggccacctatccgggcgcgtccgccgaggacgtggccgagcag
gtcaccagcatcatcgagaacgagctgaacggcgccaagggcctgctgtactacgaatcg
gtcagcgattcgaatggccaggcgcagatcaccgtgaccttccgtcccggcaccgatccc
gacatggcgcaggtcgacgtgcagaaccgcgtgtcgaacatctccgcgcaactgcctacc
gcggtcacccagcagggcctgactttcgagcagaccagcgcgggcttcctgatgatcggg
gcggtgtcgtcggtcgatgggtccatggaccagatcgcgctggccgactacatcacccgc
aatatcaagaacccggtgtcccgggtgcccggcgtgggccggttccagctgttcgccgcg
ccacgcgcgatgcgcatctgggtcgatccgaacaagctggtggcctacaacctcagcatg
gccgacgtgaaccaggccatctcgcagcagaacgcccagattccggccggccaattgggc
gcgccgcccaacctggacgccacgcgcacgactgccacggtcatggtcaacggccagctg
agttccgtcgacgccttcggcgccgtggtgctgcgcgccaaccaggatggctcgatggtg
cggctgcgcgatgtcgcgcgcgtcgaggtcggcgccgacaactaccagttcggcgcgcgc
ctgaacggccagccgaccgcggcgttcgccatcgtgctggcgcccaacgccaacgcactg
gccacggcgcaaggggtgcgcgaccagatggaggagctgtccgcgttcttcccgggcggc
gtcgagtacagcattccctatgacaccgcgccttacgtgcaggtgtccatcgagcaggtg
ctccacacgctggcggaggccatggtgctggtgttcctggtgatgtacctgttcctgcag
aacgtgcgctacacgatcattcccacgctggtggtgccggtggcgctgctgggcgcgctg
ggggtcatgctggcgctgggcttctccatcaacgtgctgaccatgttcgccatggtgctg
gccatcgggatcctggtggacgacgccatcgtggtggtggagaacgtcgagcggatcatg
gtggaggatggcctttccccacgggaagccacggccaaggcgatgccgcagatcagcggc
gccatcgtcggcatcacgctggtgctgacctcggtgttcctgccgctggccttcatgggg
ggctccgtgggcgtgatctatcgccagttttcggtggcgatggccgtgtccatcatgttc
tccggcttcctggcgctgacgttcacgcccgcgctgtgcgtgacgctgctcaaggccatc
ccgaaggggcaccatgagcagaagaagggcttcttcggctggttcaaccgcaagttcgag
gcgggcacgaatcgctaccagaacgtggtgtcccgtctcgtgcaccggtccggccgcatg
atgatcatctatctgatcctggtgatcgcgctgggctggctgtatttccgcctgcccacc
tcgttcctgccggaggaagaccagggctacaccatcaccaacatcgaattgccgtcgggc
tcgtcggcgaaccgcacgatggaggtgatcgaggatgtcgagaagtacttcatggacctt
ccgaccaccgagaacgtgatctcggtgcgggggttcagcttcaacggcagcggcctgaac
gcggcgctgatcttcgcgccgatgaaggatttctccgagcgcaagggcgagggtggctcg
gcgcaggccgtctccttcggcgccatgcagaagctgctgatgggcacccgcgacgccatg
gtgatcacggtgatcccgcccgccatctcgtcgctgggcaacgcgtcgggcttcgacttc
cgcctgcaggatcggggcggcgcgggcgccgaggcgctggcgcaggccacggccgacctg
atgggcctggcgatgaagagcgacgtgctgggcgatatccgcatcaccggcctgggaccg
ggccagcagctgagcctgacgatcgaccgcgagaaggctgccgcgctgggcgtggacttc
aacgaggccgccacgctgctgtcgacctcggtgggttcggccttcctgggcaagttcccc
aacctggggtggatgcagaacgtctgggtgcaggccgacgcggcctaccgcatggacctg
aaggacgtgctgcgcctgaacgcccgcaatgcgcagggcaacatggttcccctgtcttcc
ttcgtcagctacgagtggggcgagggtccgtcgcaggtggtgcgctacaacagctatccc
tcgatgcgcctggaaggcggcgccgcgccgggttattcctcgggtgccgccatggccgag
atggaacgcctgatgcagcagatgcccccgggcttcggctacgagtggaacggcctgtcc
taccaggaaaagcaggcgggcgaccaggcgctgatcctgatggggctggcgatgctggtg
gtgttcatggtgctggccgcgctgtacgagagctgggccattccgctgtcggtgatgctg
gtggtgccgctgggcatgctgggcgccgtgggcctggtgaccctcacgggcatgagcaac
gacgtgtacttccaggtggggatggtgaccgtgatcggcctggcggccaagaacgcgatc
ctgatcatcgagttcgcgaaggatgcctatgcgcgtggcgccggtctgtatgaagccgcc
atcgaggcagcacgcctgcgcctgcgtcccatcctgatgacctcgctggcgttcatcctg
ggcgtggtgccgctggtcctggccagcggcgcgggcgccgccagccagaacgccgtggga
gtgggcgtgattggcgggatgctggccgccacgccgttttcggttatctttgtgccggtg
tttttcgtcgcggtgctgggtctcttcaagaccaagccccgcctgctgggcgccgaggcc
aaggcccacgcgcaggagcaggcagagaagcaacgcttggaagcggcccagcagggcggc
gaccagaagaatcatcctgatcatgagggcaaggcatga
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