Ostrea edulis (European flat oyster): 125645803
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Entry
125645803 CDS
T09123
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oed03016
]
125645803
Enzymes [BR:
oed01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
125645803
Transfer RNA biogenesis [BR:
oed03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125645803
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
Flavodoxin_NdrI
Chordopox_A13L
Pik1
Motif
Other DBs
NCBI-GeneID:
125645803
NCBI-ProteinID:
XP_048727598
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All DBs
Position
6:18233441..18236659
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AA seq
666 aa
AA seq
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MFEELLPSQIITCTVVIGLACLVYIFYGNRRAKQTDKQPKPRTEKRERKIDEHRKRKIKI
LYGTQTGKSKHFADSFKKDAVYKGYLCEVVNVENYDPDEQLAYERENITCLVIFVSTYTE
GTPPKGAEWFVKWLEESASDFRVQKSLLNNLQYAVFGLGNSLYGSNFNTVGKRIDDCLHK
LSGRRVLTVGLGDENVSQSCHGSLENDYSAWKRDFWKKWKGDNSSCQEDDKNSKCGTDCN
CHEKDDIGSDDDESDGELKEGATESDIVDVEDLGRVMAKASGKTVSKSEPTEMITPLIKT
SLEKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVF
CWRHHTNPVGTEWRWKMEDAEFVLKGALQNHVSLIKQFKGVPGVQPDRFAEAMTPQHCAL
SLVGEPIMYPEINKFINLLHGKGISSFLVTNAQFPEAIRDLSPVTQLYVSVDASTKDSLK
KIDRPLFRDFWDRFLDSLDALSAKCQRTVYRLTLVKAWNTDELDNYAQLVYRGKPDFIEV
KGVTYCGESKASNLTMKNVPWHTEVVNFVQELLNRLDGDYEIASEHEHSNCVLVANTKFL
VDGKWWTWIDYPKFHSLIKLYQESDGKEKFSATDYMAPTPAWAVFGAEERGFDPKEVRHF
RKKQKE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagaattgttaccctcccagattattacatgcactgtagtaattggtttagct
tgcttggtctatatattctatggaaatagaagggcgaagcagactgacaaacaacccaag
cctcgtaccgagaaacgagagagaaaaatagacgaacacaggaagagaaagataaaaata
ttgtacggaactcaaacaggaaagtcaaagcattttgcggatagttttaagaaagatgct
gtttacaagggatacctatgtgaagtggtgaatgtggagaactatgacccagatgaacaa
ttggcatatgaacgtgaaaacataacttgccttgtgatatttgtatccacgtacacagaa
ggaacgccacctaaaggagcagagtggtttgtgaagtggttagaggaaagtgcctcagat
tttagagttcagaaaagtctgttgaataatttacaatatgctgtttttggccttggaaat
tctctctatggcagtaacttcaatactgtaggaaagcgaattgatgactgtttgcacaag
ctttctgggaggagagttttgacagttggtctaggagatgaaaatgtatctcaaagctgt
cacggaagtctggaaaatgattatagtgcatggaaaagagatttttggaagaaatggaag
ggagacaattcttcttgtcaagaagacgataagaattccaaatgtggtactgattgcaac
tgccatgaaaaggatgatattggatcagatgatgatgagagcgatggtgaattgaaagaa
ggggctactgaaagtgatattgttgatgttgaggatcttggcagagtcatggcgaaagct
tctggaaagactgtatcaaaaagtgaaccgacagagatgataacaccacttataaagaca
tctttggaaaagcaaggttacaaactgattggatcgcactcaggagtcaaattatgcagg
tggacaaagtccatgctacgtggtagagggggatgctacaagcacacattttatggcatc
gaaagtcatagatgcatggaaacaacacctagcttagcttgtgccaacaagtgtgtgttc
tgttggagacaccataccaatcctgtcggcacagaatggaggtggaaaatggaagatgct
gaatttgtactgaagggagcattgcaaaatcatgtttcccttatcaaacaattcaaaggg
gtacctggtgttcagcctgatcggtttgcggaggccatgacacctcagcattgtgcgttg
tcactggttggagaacccattatgtatccagaaataaacaaattcatcaaccttttacat
ggcaaaggaatttcatcatttttggttaccaatgctcagttcccggaagctataagagac
ttatctccggtcacacagctgtatgttagtgtagatgccagtacaaaagatagtttgaaa
aaaattgatcgcccgctgtttcgagatttctgggatcggttcttggacagtctagatgct
ttgtcagcaaaatgtcagagaactgtgtacagattaactttagtcaaggcctggaatact
gatgagttggataactatgcacaattggtgtacaggggtaaacctgattttattgaggta
aaaggtgttacatattgtggcgagtcaaaggcatcaaatcttacgatgaaaaatgtgccg
tggcacactgaggtggtcaactttgttcaagagctgttgaatagactggatggtgattac
gagatagcctcagaacacgaacattcaaactgtgttctggttgccaatacaaaatttctt
gttgatggaaaatggtggacgtggattgactatccgaagtttcactcgctaatcaagctg
taccaagagagtgatggaaaagagaagttttcggccacagattacatggcaccaactcca
gcatgggctgtgtttggggccgaggagaggggctttgatcccaaagaagtcagacatttt
aggaaaaaacagaaagaataa
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