Ostrea edulis (European flat oyster): 125650388
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Entry
125650388 CDS
T09123
Name
(RefSeq) syntaxin-like
KO
K04560
syntaxin 1A
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125650388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oed04131
]
125650388
Membrane trafficking [BR:
oed04131
]
SNARE
Syntaxin (Qa)
Stx-PM
125650388
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
FapA
Ferritin
Prominin
Syntaxin-6_N
DUF4658
ATG17_like
YtxH
DUF6161
T2SSF
DUF6584
Tlp
Uso1_p115_C
Translin
TMPIT
CCDC28
Herpes_UL25
Nup54
ISG65-75
DUF848
Motif
Other DBs
NCBI-GeneID:
125650388
NCBI-ProteinID:
XP_048734615
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All DBs
Position
1:51792379..51839825
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AA seq
292 aa
AA seq
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MTKDRLAALKAAQSDNEEQDDVHTVSMEPPGGFMDMFFEQVEEIRGMIDKIAYNVDEVKK
KHSAILAAPQPDDKTKEELEELMTDIKKTANKVRARLKDIEQNIEKEEHSNKTSADLRIR
KTQHATLSRKFVEVMNDYNACQIDYRERCKGRIQRQLEITGRTTTNDELEDMLESGNPAI
FTQGIIMETQAAKQTLADIEARHNDIIKLETSIRELHDMFMDMAMLVEQQGEMIDRIEYN
VEQAVDYIETAKSDTKKAVKYQSKARRKLIMIIICVVILLAVIAIILATTLG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagatcgtttagcagctctcaaagcggctcaaagtgacaatgaagaacaagat
gatgtgcacacagttagcatggaaccacctggtggttttatggatatgttttttgaacag
gtggaagagattcgtgggatgatagacaaaatagcttacaatgtggatgaagtgaagaaa
aaacacagtgctatccttgcagctcctcaacctgatgacaaaacaaaggaagaattggag
gagttgatgacagacatcaagaaaactgcaaataaagtcagggccagattaaaagatatt
gaacaaaatattgaaaaggaagaacattcaaataaaacttcagcagatttaaggatacgc
aaaacacaacatgcaacactgtcccgtaaatttgtggaggtcatgaatgactacaatgct
tgtcagatagactacagggagaggtgtaaaggccgcattcaaaggcaactggagatcact
ggaagaactacaaccaacgatgaattggaagacatgttagaatcaggaaatccagcaata
tttacgcaagggatcattatggaaacccaagcagcaaaacaaactctagcagatatagaa
gctcgacataatgacattattaagttggaaactagtataagagagctccatgatatgttt
atggatatggccatgttagtagaacaacagggagaaatgatagacagaatagaatacaat
gtagaacaggctgtggattatatagaaacagctaaaagtgatacaaagaaagctgtcaag
taccagagtaaagctaggcggaaattaataatgatcatcatatgtgttgttatcttactt
gctgtaattgcgattattttggctaccaccctgggttaa
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