Ostrea edulis (European flat oyster): 125663683
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Entry
125663683 CDS
T09123
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125663683
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
125663683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
125663683
NCBI-ProteinID:
XP_048751966
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Position
1:22096602..22130880
Genome browser
AA seq
2016 aa
AA seq
DB search
MSHSTPSGNGCSLEDCYTNLFSLTEIRGIKWRRLSANPEYTTVDQLEDPVLVSYSKCIKA
DILSVWRRVPRSSDQPRYTTDQLAYNKELWIFWYGDEPENLNRLLSEDLKEEASGGWDKG
ECGISYECRTLIFKALHNLIEKCLLHRGFVRIGKWFVQPHDVNLSGPERSTHLSFCFNFF
LHGESSVCASIEVKQHPPVWRLTNNHLSLAQENPACLQVILVPYGLCGSLTGNTYRETDQ
SSSKIMEEWSQFYPIDKSDGIDVGKMPPLVEVIVAGVRMKYPSCFVLLSEMEDAPTRAPN
PSIHRPSVAPGGLLTPPTSPAAAVLIPGTDAGGKIQCAPYTGAHTDVNADLMAKSAKAFS
ARVTEKVTQDSLITAGIAKRSMETISDEAAVGVWNFNDPSVKTTCNCARHRGSKNKLSQQ
IKNSIPPVGKKGEKPDKLERQQSRLSRGAVPFHRRHLMGEDAAQNDVPLVLSGPVPSFNS
PPGNALLPQLNNSSETNGGATASVEASPAEMSPLNGPQSPPDPTMPKLSPHPPIDAGTEN
KTIKTSAEAPLQNNTPSEFLKPANASTPKVAENIPSPLSWPGQQSEAKTASINNWIKSSQ
PQPEVLGIKRPILPSKDTDEDELVTKSLYDYHLIHSWSEYPIKRARVERSSSIVEVGPES
PSLPMNYISQKHKVKQPDPYDFNDDEQSINPATVSKRMFRSSRDDFLNKRMDDDMKMVDF
GDPFSVEIPDSTSSPPETPSAPRNLIHTSDLKPSYDDLAHIFDSDDSDRDDGFGDHGQMV
DKLDDGTTKFIMGNAMTVTDGAISVSELSKMYPTPPSNNASSDRSPGPHDIMDNHIPEKP
VIKTEFIPTIKEDFFRDLPAVYKSAEQADFLSSDKYSPIALQSSKMSPVTRPPEYKASWQ
FSNFEKPMPQSNYTNIPSIENIPSMSSRMPSSTVENSPATFLNNSVGQQRTPMSNYNELQ
SPASNASSYLNKTLNSIDNQGTNHQIPEVHSLIVNVFLMDSRLNLFRDVNFDSCNICVCN
MNIKGADTEIYLPDSSGESATRCVCGFSAIVNRRFGHNSGLFYEDEVDITGIRNDRYEGR
KPSLLAVEYQKDNGKLSEYSDWPHEILNLLISQFSIPYPSASTIQHILRLSMMNTTSGYA
EAASSLLDILQLQDGNDITYMALDLGRQAMEHCSPNKLDDPSLKSTCLHKWQFLQGASRI
PQNSQDSVQVLKSLQPILQDAIQNKRSIPLWEHKYKLSGPLTWKEFHQLAGRGSDENSTP
QPIPSFLAGFDGDWLSLSPYSLRFWDKQFLEPYGKPRDIAYIVLAPDNDYIINAIILFFK
ELSNVYELSRMGRHSPVSLKLRDGIMRVGKKIAEKFSAEEHPDDWFKFIGNSSVASKLRL
YSQVCRSFLAPLLAQQSLDQSVFEPLSNNRPGYKPTESKPDVNLTDHNSFSMPAPQTHMA
EDKENLESSANARDSLYLDSEQSTNQDCPALMVYLIDSFTYGSDWDPSVERLTKVGLLKC
YHQLVRSLPENLQQNISLQIIPLSTILESTEKGSNMHTLQSISFSVFSMCRWNLAHTITG
RHLTGFGPAAAGEIFLRKKEADKAGGIKLYSPPFVLAPTKDTQTILAESCGEKLERSFVL
FCAYCLSEDQRFLLAACTDERGEMMETCSINIEIPNRSRRKKASARKIGLQKLWDFLLGV
VSLSSGPCRLVIGRFGRIGHGEMKGWSGLLSKKNLELAGKKMKEMCSQCSLNIGSCDTPG
ILSACLVSLESLTSFHIMADAVKIEEKMSSNCPLQTPRDASTTHILVFPTSAIAQANSHA
PVTEMSVNIAIEDTMPMDDLVDSGEQGNNLYSILDQECLLEVFDEITTNYPDQGNALGNI
SNPGSPTGDSVQHNTSSMNGQFQKNPQSTDPQDEMPNLLNQPLALGYFTSTARAGPLPHW
FWSGAPEKEFQCPSCFKAALHIHSSSKHDEFSYTQHNKNSHPLDSTLTPDVLRYVLETYN
ALSWLTFDPVQNDRQSCLPIHFMVLMQMYHALNAFV
NT seq
6051 nt
NT seq
+upstream
nt +downstream
nt
atgagtcactcaactccatcagggaacggctgttcacttgaggattgttacacaaattta
ttttcactcacggagattcgtggaataaaatggagaagactgtcggctaatccagaatac
acaactgttgaccagttggaggacccagtgttggtgtcctattctaaatgcattaaagct
gacattttgtcggtatggaggagggttccacggagttcagatcaaccaagatacactact
gaccaactggcttacaacaaggaactgtggatattttggtatggggatgagcctgaaaac
ttgaaccgtttgctgtcagaagatttgaaagaggaagctagtggtggatgggacaagggg
gaatgtggaatatcctatgaatgcagaactctcatttttaaagctcttcataacctcatt
gaaaaatgccttcttcatagaggatttgtgagaatcgggaaatggtttgtccaacctcat
gatgttaatcttagtggaccagaaaggagtacacacttatccttctgtttcaacttcttc
ctacatggagagagttctgtgtgtgcaagtatagaagtgaagcagcacccccctgtttgg
cgattgacaaataatcacctatcattggcacaggaaaacccagcatgtttacaagtaata
ctggtgccatatgggttgtgtggttccttgacggggaatacatacagggagaccgaccag
tcatctagtaagataatggaagaatggagccagttttatcctattgataaaagtgatgga
attgatgttggtaaaatgccaccactggtagaggtcattgttgctggtgtaaggatgaag
tacccatcctgttttgtattactctctgaaatggaagatgctccaacgcgtgcaccaaat
ccgagtatccatcgtccaagtgtggccccaggaggcttattaactccacctacctcacca
gcagctgctgttcttatcccagggactgatgctgggggaaagatccagtgtgcaccatac
actggagctcacacggatgtcaacgcagatctaatggctaagtcagccaaagcatttagc
gccagagtcacagaaaaggttactcaagatagtctcattactgcaggcattgcaaaaagg
tccatggaaactatcagtgatgaggcagcagtgggggtttggaatttcaacgatccttct
gtcaaaacaacttgtaattgtgctagacacagaggttctaaaaacaaactcagccaacaa
ataaagaatagcatacctcctgttgggaagaagggagaaaaacctgataaacttgagcgc
cagcaatcacgtctgtcaagaggtgctgttccattccatcgtcggcacttgatgggggag
gatgcagcacaaaatgacgtgccgttagtcctgtctgggccagttccctcattcaattct
ccaccagggaatgctttacttccacaactaaacaattcttctgaaacaaatgggggtgca
actgcaagtgtagaagcttcaccagcagagatgtctcctcttaatggacctcagtcccca
ccagaccctaccatgcccaaactaagtcctcatccacctatagatgcaggaactgagaat
aagaccatcaaaacatcagctgaagctccactacaaaataatactccaagtgagtttctt
aaacctgccaatgcatctacaccaaaagtggcagaaaatattccatcgcctctgtcgtgg
cccgggcaacagagcgaggctaagacagccagtattaacaactggatcaagtcctctcag
ccccagccggaggtgctgggtataaagcgaccaatactaccatccaaagatactgatgag
gatgaactagtcacaaaatctctctatgattatcatttaattcactcctggtcggaatac
ccaatcaagagagctcgtgtggagaggtcaagttctattgtggaggttgggccagaatcc
ccaagtcttccaatgaattatatatcacaaaaacataaagtaaaacagccagacccctat
gatttcaatgatgatgagcaatctatcaatccagccaccgtatcaaaacgaatgttccgc
tcaagtcgagatgacttcctcaataagagaatggatgacgacatgaagatggtggatttt
ggagatcccttttcagttgaaataccagactctacatcatctccaccagaaactcctagt
gcacccagaaatctgattcacacgagtgatctaaagccaagctatgatgatctagctcac
atctttgattctgatgattcagatagagatgatggttttggtgaccatggccaaatggtg
gacaaattagatgatggtaccactaagttcataatgggcaatgcaatgacagttacggat
ggagcaatatctgtctcagaactttctaaaatgtatcccacacctccttcaaacaatgcc
tcttctgacagatccccaggaccccatgatatcatggacaaccatatcccagagaaacca
gtcatcaagaccgaatttattcccactataaaggaagatttcttcagggatttgcctgct
gtgtacaagtctgcagaacaagcggactttctcagctctgataaatactcaccaatagca
ctacagagcagcaagatgtctcctgtcactcgcccaccagagtacaaggcatcctggcag
ttttctaattttgagaaacctatgcctcaaagcaattatacaaatataccgtccatagaa
aacataccgagcatgtcatcacgaatgccatcaagtacagtagaaaattcacccgccaca
ttcctgaacaatagtgttggacaacaaaggactccaatgagtaattataatgaactccag
tctccagcatcaaatgcatcttcatatctcaacaagacattgaattctattgacaaccaa
ggaacaaatcatcaaattccggaagttcacagtctcattgtaaatgttttcttgatggat
tctaggttgaatttgttccgtgatgtgaattttgacagttgcaatatctgtgtgtgtaac
atgaacattaagggtgcagacacagaaatatatctaccggattcatcgggggaatctgcc
actcgctgtgtatgtggatttagtgctattgtgaatagacgatttgggcataattctggg
ttattttatgaggatgaagtggatattacgggtataagaaatgatagatatgaaggacgg
aaacccagtttgttggccgttgagtatcagaaagacaatggcaaactgtccgagtattca
gactggccccacgagattctaaatctacttatcagccagttctccattccttatccttca
gcttctacaatacaacatatacttagactcagcatgatgaacactacatccgggtatgca
gaagctgcttcttctctgttggatattttacagcttcaagatggcaatgatatcacttac
atggcattggatctcggacggcaggcaatggaacattgttctccaaacaagcttgatgat
cccagtctaaagtccacatgcctacacaagtggcagtttctgcaaggtgctagtcgaata
cctcaaaattctcaagactctgtacaagtcttgaaatctcttcaacccattctccaagat
gccatacagaataaacgaagtattcctctatgggaacataaatacaaactgtcaggacca
cttacttggaaagaatttcatcaacttgctgggagaggctctgacgagaactcgacccct
cagcctattccttccttcctagccgggtttgatggagactggttgtccttgtccccatac
tctctcaggttttgggataaacagtttttggaaccatatgggaaacctcgtgatatcgct
tacatcgtcttggctccagataatgattatatcatcaatgcaattatattattcttcaaa
gaattaagtaatgtatatgaactgtctcgcatgggaagacattcaccagtatctctgaag
cttcgggatggaatcatgagagtgggtaaaaagatagcagaaaaattctcagccgaggaa
catccagatgactggtttaaattcattgggaactccagtgtagcaagcaagttgcgcttg
tattcccaagtgtgccgctccttcttagcaccacttttggcacaacagagtttggaccag
tcagtatttgaaccattatcaaataacagacccggttacaaaccaactgagagcaaaccc
gatgttaaccttactgatcacaattcattcagtatgccagccccacaaactcacatggct
gaagacaaagaaaacttggagtcatctgcaaatgcacgagacagcttgtacttggattct
gagcagagtacaaatcaggattgtccagctttaatggtgtatttaattgattccttcact
tacggttctgactgggaccccagtgttgagagacttaccaaagttggactactcaagtgc
taccatcaattggtgagatctctacctgaaaaccttcaacagaatattagtcttcagatc
attcccctcagtaccattctggagagcacagagaagggcagtaacatgcacactctgcag
tccatatcattctccgttttctccatgtgtcgttggaatctcgctcacaccatcactgga
agacatcttactggatttggacctgctgcagctggagaaatttttctcaggaaaaaggag
gctgacaaggcaggtggcattaagctgtacagtccaccctttgtgttggcccccaccaag
gacacccagacaatactggcagaatcatgtggggaaaagcttgagagaagttttgtgctt
ttctgtgcctactgtttgtcagaggaccagcgttttcttctagcagcgtgtacagatgag
cgaggagaaatgatggaaacctgctccattaatatagagattcctaacaggagcagaaga
aagaaagcatctgctagaaaaattgggctgcagaaactgtgggactttttgcttggagtt
gtgtctctgtcatctggaccatgtcgacttgttattggtcgctttggaaggataggtcat
ggagaaatgaaagggtggtctggtttattgagcaagaagaacttggaactggctggcaag
aagatgaaggagatgtgcagtcagtgttcccttaatattggcagctgtgatacccctggc
attctcagtgcctgtttagtgtccctagaatctctcacctcatttcatattatggctgat
gctgtcaagattgaggaaaaaatgagcagtaactgcccattacagacccctcgtgatgct
tccaccacccatattcttgtctttccaacctccgctattgcacaggctaactctcatgca
ccagtgacagagatgtcagtaaacatagctattgaggacaccatgccgatggatgatcta
gttgattcaggggaacaaggaaacaatctgtactccattctagaccaggagtgtttgttg
gaagtatttgatgagatcaccacgaattacccagatcagggcaatgcattgggcaacata
tccaatcctggctcaccaaccggagattcagtccaacacaacacatctagcatgaatgga
cagtttcagaaaaatccccaaagcacagatccacaggatgagatgcccaacctcttgaac
cagccccttgccctgggatacttcacctccactgccagagcaggacctttgcctcattgg
ttctggtctggagccccagaaaaagaatttcagtgtccttcttgcttcaaggctgcactc
catatccacagttcctccaaacatgatgaattctcgtacactcagcacaacaagaattct
catcctcttgattccacactcactcctgatgtattgagatatgttctggaaacttacaat
gctctgtcctggttgacctttgaccctgtacagaatgatcgccagtcatgtttgccaatc
catttcatggtgcttatgcagatgtatcatgcattaaatgcatttgtatga
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integrated database retrieval system
