Ostrea edulis (European flat oyster): 125675188
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Entry
125675188 CDS
T09123
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 47-like
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
oed
Ostrea edulis (European flat oyster)
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oed01002
]
125675188
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oed04121
]
125675188
Enzymes [BR:
oed01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125675188
Peptidases and inhibitors [BR:
oed01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125675188
Ubiquitin system [BR:
oed04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125675188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
125675188
NCBI-ProteinID:
XP_056014221
LinkDB
All DBs
Position
3:complement(57289248..57334151)
Genome browser
AA seq
1393 aa
AA seq
DB search
MVTGENTQMVPTENVCVADEEKYVCIVRDMVDTQCHGIRHTINLPGSTPVKDMMTQVAEM
FGYVDDTIAVHYEIQTGAEVHEVSLGDHEGKKLQDICTNGIKKHNFTIAEKEGTLPQKAE
SGTSSGTSSSTSGVSGASGTSSSCFNGASTSTSTDFTYPESYSYATAVIKSDTGYVGLVN
QAMTCYLNSLLQTLYMTPEFRNAVYRWEFDGREEDMSKSIPFQLQKLFLLLQTSKKKAIE
TTDLTRSFGWDSSEVWQQHDVQELCRVMFDALELKWKKTDQANLINNLYQGKVKDYVKCL
ECGNESARLDTYLDIPLVIRPFGSNESHSSVDEALQAFVEPETLDENNQYFCEKCNKKCD
AHKGLKFVSFPYLLTLQLKRFDFDYSTLHRIKLNDRMIFPGVLNLNHLIEPEKAGSEETT
ANTLEESSDEGIDEGIEIESSLTGTSSENSSLSSEAAANNKNVRAAGAKGPYAYELFSIM
VHSGSAAGGHYYAYIKSFKDGQWYSFNDQHVSKITYDDITKTYGGSSTSRGYYSAAYTSS
TNAYMLMYRQIDKQRNKGISWHLIILFMVNKCVCTIVILYFIVSSDFIQPENFPKHLKLA
LQRLKDREEQEIRQRELDKSTCKIKVYYFHPREKRKMEQKXEVHKDKTLKSSLATEMCSR
LFSIDKSVPLDCCRLVKFDEYQDTLECSFAMKMTXPMGLLLGGVKQAYNFDLLLETKRAD
QVFQEYKPGGVTVKLFIADLPNDIIQEPPISVRAYHSQTVAEFKKMVGEVLNVSAAQMRC
VLERFHNDLKLLFVPNKTLKTXGFFKSNKVYVEFSGEEDTTNFTQTHFFRLLDRHQNTIR
IHVNLPSSSDVEDFLKSSSRHEQLLKNAINSGKSREDSSTSLEIRSKNGSDSLDEGISDR
GSDSEIDFKLKKTTLQQSRSDPSIYHSCQSIDNGRVSPLGSASEGRASSPIGHSSSSQDT
STSAEFSISTSYRGVCNIYDGQEEATDSVLEDSNSREPVEHGESDSEQTAPPSPGDRVIN
DTDFKPEENWDSDCDNDVTITKEEPSKRYFHIVQNEMDVLTKQRNLTVLVDKRITLGAFK
KELEAHVGTTSDNFKVYRVYSNNQEFESIRLTETLSFFEDGKLNIKLGRALKPGEYRVKI
YQLLVNESEPGKFLIDTIFAKGMSVQESKKLIIPEIKEQCGIDIPLERCRLRKKTWRNPG
TVYVDDQVYEDEVHIFANWEVFLQILDGPEEMSTTSQLAIFVRRWKPSSYELDQFQEVIL
SSQTVDDLKEKISDISGIPVEDIEYAKGRGTFPCDISLLEIHNDLDWSPHVTSLNSWPLY
ICDDGCVLYYRDRTEKLAELSETRKKELQQKENARMARGTVRSSYSPRKERALKIYTDES
PTVSDAKSPPDLD
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggtcactggagaaaatacacaaatggtgccaaccgagaatgtctgtgtggcagatgag
gagaaatatgtgtgtattgtgcgggatatggtagacacccagtgccatgggatacgacac
accatcaacttaccaggctccaccccggtgaaggatatgatgacccaggttgctgagatg
tttggttatgtagatgacacaatagccgtgcactacgagatacagaccggagcagaggta
cacgaggtgtctctcggagaccatgaagggaagaaacttcaagatatctgtacaaatgga
atcaagaaacacaattttaccatagctgagaaagagggcacactaccccagaaagcagag
agtggtacctcctctggcactagctcctcgacctctggtgtatcaggtgcctcaggtacc
tcctcctcatgcttcaatggagcctcaacttctacttccaccgacttcacttatccagag
agctactcctatgccactgctgtcattaagtctgatacaggttatgttggactggtgaat
caggctatgacctgctatctgaacagccttctgcagactctttatatgaccccagagttc
agaaatgccgtatacagatgggagtttgatggaagagaagaggacatgtctaaaagtatc
ccttttcaactacagaaactgtttctgctgcttcagaccagcaagaaaaaggccatagag
acaactgacttgaccagaagctttggctgggatagtagtgaagtctggcaacaacacgat
gtccaggagttatgtagagtcatgtttgatgctctggagctcaaatggaagaagactgac
caggcaaatctcatcaacaatttgtaccaaggcaaagtcaaggactatgttaaatgcttg
gagtgtggaaatgagagtgctcgattagatacatatcttgatatacctcttgtcatccgc
ccatttggctccaatgagtcacatagtagtgtggatgaggccctgcaggcatttgtggaa
cctgaaacattagatgaaaataaccagtacttctgtgagaagtgcaacaaaaaatgtgat
gcccacaagggtctgaagtttgtttcctttccatatttattgactctgcagttgaaaaga
tttgactttgattattcaacactgcacaggattaagctgaatgaccgaatgatttttcct
ggagttctaaacctgaaccacttaattgaaccagaaaaagctggttcagaggagaccaca
gccaacactctggaagagagtagtgatgaaggcattgatgaaggaatagagatagaatcc
agcctgactgggacctcttcagaaaattctagtctttcgagtgaagccgccgcaaacaac
aaaaacgtgagagctgcaggagccaagggtccatatgcctatgagctgttctccataatg
gtgcattctggtagtgctgcaggcggacattattatgcctacataaagtctttcaaagat
ggacagtggtacagttttaatgatcaacatgtctcaaagataacgtacgatgatattact
aaaacgtatggtggctccagcacgtccaggggatactactccgctgcctacacaagttcc
acaaatgcctatatgctgatgtacagacagattgataaacagcgaaataaaggtatttca
tggcatctgataattttgttcatggttaataaatgtgtatgtacaatagtgatcctgtat
tttattgtttcatcagattttatacaacctgagaatttccccaaacatctcaaattggct
ctacaaagactgaaggaccgagaagaacaagaaatccgacaacgagaacttgacaaatct
acctgcaagattaaagtgtactactttcacccaagagagaaaagaaagatggaacagaaa
nttgaagttcacaaggataagaccttaaaaagttcattggccacagaaatgtgttctagg
ttgtttagcatagacaagtctgttccacttgactgctgtcgtctggtgaagtttgacgag
tatcaggacacgctcgagtgctccttcgcgatgaagatgacannccccatgggtttgtta
ctgggaggagttaaacaggcctacaactttgacctcctcctggaaacgaagcgggcagat
caggtgttccaagaatacaagcccgggggtgtgacggtaaagctgtttattgctgactta
ccaaatgacatcatccaggagccccctatcagtgttcgagcctaccattcacaaactgtc
gctgagttcaagaaaatggtgggggaggttctgaatgtctcagcagcccagatgagatgt
gttttggagaggtttcacaatgacctcaaattattatttgtccctaataaaaccctgaaa
actngagggttcttcaaaagcaacaaggtgtatgtggaattttctggtgaggaggatacc
acaaactttacacaaacccacttcttccgattgctggatcggcaccaaaacacaatccga
attcacgtcaaccttccctcctcatctgatgtggaagattttctcaagtcaagttcaaga
catgaacagcttttgaaaaatgccataaattctggaaaatctagagaagacagttcaacc
tctttagaaataaggagtaaaaatggaagtgactctttagacgaggggataagtgatcgt
ggaagtgatagtgaaattgatttcaaactgaagaaaacaacacttcaacagtccagaagt
gacccttcaatttaccacagctgtcaatcaattgacaatgggcgtgtcagtccccttggt
tccgcctctgagggacgggccagtagtcccattggtcacagtagcagtagtcaggataca
agcactagtgcagagtttagtatttcaaccagttacaggggtgtgtgtaatatttatgat
ggacaagaagaagcgacagacagtgtgcttgaagattcaaacagtcgtgaaccggtcgag
catggagagagtgattcagagcagactgcaccgccctcacccggggaccgagtgatcaat
gacactgattttaaacccgaggagaactgggattcagattgtgataatgatgttacaata
acaaaggaggaaccctctaaacgctactttcacattgttcaaaatgagatggatgtgctt
acaaaacagagaaatttaacagtgcttgtcgataaacgaattacacttggggctttcaaa
aaggaactagaagcacatgtaggaacaacttctgataactttaaggtttacagagtctac
tcaaataatcaagagtttgaaagcatcagactgaccgagacgctctccttttttgaggat
ggaaagttgaatatcaagttaggtagagccctaaaaccaggtgaatacagggtcaaaatt
tatcagctgcttgtcaatgaatcagagccgggaaagttcttgatagacacaatatttgcc
aagggaatgtcagtccaagaatcaaagaaactgattataccagagatcaaagaacagtgt
ggcatcgatattcctcttgagagatgtcgactgaggaagaagacgtggagaaatccggga
actgtctacgtagatgatcaggtctatgaggatgaagtccatatctttgcaaactgggaa
gtcttcttacaaatcctggatggacccgaggagatgtctacaacatcacaactggccata
tttgttcgaagatggaaacccagcagttacgagctggaccaattccaagaagtgattctg
tcctcccaaaccgtagacgacctcaaagaaaagatatctgatataagtggaatacctgtg
gaagatattgagtatgcaaagggacgagggactttcccatgtgacatctcgctgctggag
attcacaatgatttggattggagtccccacgtaaccagcctcaactcctggccgctgtat
atctgtgatgatggatgtgttctctactacagagacagaacagagaagttagcagagttg
tcagaaactagaaagaaagaactacaacaaaaggagaatgccagaatggcacgtggaacg
gttcgttcatcatactcgccaaggaaagaaagagctcttaaaatctacacagatgaatca
ccgacagttagtgatgccaagtcgccgcctgatttagactga
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