Ostrea edulis (European flat oyster): 125681531
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Entry
125681531 CDS
T09123
Name
(RefSeq) cyclin-dependent kinase 7-like isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
oed
Ostrea edulis (European flat oyster)
Pathway
oed03022
Basal transcription factors
oed03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oed00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125681531
09124 Replication and repair
03420 Nucleotide excision repair
125681531
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oed01001
]
125681531
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oed03021
]
125681531
03019 Messenger RNA biogenesis [BR:
oed03019
]
125681531
03400 DNA repair and recombination proteins [BR:
oed03400
]
125681531
Enzymes [BR:
oed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
125681531
2.7.11.23 [RNA-polymerase]-subunit kinase
125681531
Protein kinases [BR:
oed01001
]
Serine/threonine kinases: CMGC group
CDK family
125681531
Transcription machinery [BR:
oed03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125681531
Messenger RNA biogenesis [BR:
oed03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
125681531
DNA repair and recombination proteins [BR:
oed03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125681531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
FTA2
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
125681531
NCBI-ProteinID:
XP_048777635
LinkDB
All DBs
Position
2:complement(59613422..59767064)
Genome browser
AA seq
341 aa
AA seq
DB search
MMEDKSRRYEKIEFLGEGQFATVYKAKDLKTGNIVAVKKIKVGTRAEAADGINRTALREI
KLLQDLHHKHIIGLQDVFGLGHRSNVNLVFDFMETDLEIIIKDQTIVMTPGHVKSYVLQT
LKGLEYLHMHFILHRDLKPNNLLVNDKGILKIGDFGLAKFFGSPTRIYTHQVVTRWYRCP
ELLFGARQYGTGVDIWAVGCILAELLLRVPFLPGDSDLDQLSRIFQVLGTPTEKDWPNIK
ALPDFIQFKSFPGTTLKEIFIAASDDLLEVLSDMLKMDPLQRCTSTQALKMAYFSNKPGP
TPGPQLPRPGSNKIVSQKEENLSLKRKIQAQGGGLIKRLQF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagataagtcaaggcggtatgaaaaaatagagtttttaggtgaagggcagttt
gcaacagtctataaagcaaaagatttgaaaactggaaatattgtggcagtgaaaaagatt
aaagtgggcactagagctgaagctgctgatggcataaacagaactgcattacgggaaatc
aaactactgcaagatctacatcacaaacacattatagggcttcaagatgtatttggactg
gggcatcgttcaaatgtcaatttggtgtttgattttatggaaactgatttggagattatc
ataaaggaccaaaccattgttatgaccccaggtcatgtgaaatcttatgttctacagaca
ctcaaaggactggaatatctccatatgcattttatcttgcatagggatttgaagccaaac
aatttacttgtcaatgacaaagggattttaaagataggagatttcggattggccaaattc
tttgggtcaccaacaaggatatatacacatcaagtagtgaccagatggtacaggtgccca
gagcttttgtttggtgctcggcagtatggaacaggggtggacatatgggcagtaggatgt
attctggccgaattgttactgagggtaccatttctgcctggcgattcagatttggaccag
ctgagcagaatatttcaagtacttggtacaccaactgagaaagactggccaaatatcaaa
gccttaccagactttatccagtttaagtcattcccaggaactactcttaaagagatattt
atagcagcatcagatgacctacttgaagtgctatcagacatgctgaaaatggatccttta
caacgctgtacgtctacacaagctttgaagatggcatacttcagcaacaaacctggtccc
acccctggaccacagttacctaggcctggcagtaataaaattgtttctcagaaggaggaa
aacttgtcactgaaaaggaaaatacaagctcaaggaggtggtcttataaaaaggttacag
ttttag
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