Olea europaea var. sylvestris (wild olive): 111367196
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Entry
111367196 CDS
T05244
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111367196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111367196
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
111367196
Prokaryotic type
Archaeal type
TFB
111367196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
TF_Zn_Ribbon
DUF2387
zf-UBP
Motif
Other DBs
NCBI-GeneID:
111367196
NCBI-ProteinID:
XP_022843715
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Position
18:3728348..3733207
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AA seq
501 aa
AA seq
DB search
MATEMRCPYCSASQGRCATSTSGRYITECVSCGRVVEERQTQPHHLFHIRAQDSPLCLST
SDLPTPIVSHSDDPFEPTGFITAFSTWSLEPYPIFAHTSLSFAGHLAELERVLETTSPSN
SNSNSVVVDNLRAYLQIIDVASILGLDYDISDHAFQLFRDCSSATCLRNRSVEALATAAL
VQAIREAQEPRTLQEISIAANLPQKEIGKYIKILGEALQLSQPLNSNSISVHMPRFCTLL
QLNKSAQELATHIGEVVMNKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTE
VTLRKVYKELLENWDDLLPSNYNPVVPPEKAFPTATIPSGRSLTSKNDLVEGSSSDRDKH
SEVKYTKPSDILDLSRQSRGKDNAMQVTPSSWRPQVPVGASTIQKPRERNQTATQNMEID
LQYKNREEKRVDTDARGASRSPSSVHFPNPPAFAAGVVPWPFRPPTTSSHSLSAQFVQGA
KGASNVVDKGSSKEIGNEKVI
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgaaatgcggtgcccatactgctcagcctcgcaggggcgttgcgccaccagc
accagcggccgttatataactgagtgcgtgtcgtgtggccgcgtagtggaggagcgccaa
acgcagccccaccatctcttccacatccgtgctcaagactctcccctctgtctatccacc
tccgaccttcccaccccaatcgtttctcactccgacgaccccttcgaaccgacggggttc
attacggccttctccacttggtcgctcgagccctacccgatattcgctcatacttctctt
tcatttgctggccacttagctgaactcgaaagagtgctcgaaacgacgtcgccgagtaat
tcgaattcaaactcggtggtggttgataatttaagggcttatttgcagataattgatgta
gcatcgattttggggcttgattatgatatttcggaccatgcgtttcagctctttagggat
tgttcttcggctacttgtttgaggaatcgaagcgtagaagccctagccactgcagccctc
gtgcaggccattagagaagctcaagaacctagaacccttcaggaaatatcaattgctgcc
aatctaccacaaaaggagatagggaagtacatcaagatacttggagaagctctacaacta
agtcagccccttaatagcaattcaatatcagtccacatgccgagattttgtacacttctc
caacttaacaaatctgctcaggagttggcaactcacatcggtgaggttgttatgaacaag
tgcttttgcacccgtaggaatcctattagtatatctgcagctgccatttatttggcctgc
caattggaagataaacgtaaaacacaggctgaaatctgcaaggtgacaggcctaactgag
gtcactcttcgaaaggtttacaaggagctgttggaaaattgggacgatctacttccatca
aattataatccagttgttcctccagaaaaggcgtttccgaccgcaaccattccgtcaggt
cgttccttgacttctaaaaatgatctagtcgaggggtcttcatcggacagggacaagcat
tctgaagtgaagtatactaaaccgagcgatatcctagatttatcccgtcaatccagaggt
aaagacaatgcgatgcaagtcacaccatcttcttggaggccccaggttccagttggagcc
tctactattcaaaaacctcgtgaaaggaatcaaactgcaacccaaaatatggaaattgat
ttacagtacaagaatcgtgaagagaaaagagtggatactgatgcaaggggcgcgtctagg
tctccaagctcggttcattttcctaatcctcccgcttttgctgccggtgtcgtcccatgg
ccatttcggcccccaacgacatcgtcccattcgctttctgctcagtttgtgcaaggagca
aaaggagcttccaatgttgtggataaaggatcctcgaaagagattgggaatgaaaaggtt
atttag
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