Olea europaea var. sylvestris (wild olive): 111408771
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Entry
111408771 CDS
T05244
Name
(RefSeq) polyadenylate-binding protein 5-like
KO
K13126
polyadenylate-binding protein
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03015
mRNA surveillance pathway
oeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111408771
09123 Folding, sorting and degradation
03018 RNA degradation
111408771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111408771
03041 Spliceosome [BR:
oeu03041
]
111408771
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111408771
mRNA cycle factors
Stress granule specific factors
111408771
Spliceosome [BR:
oeu03041
]
Complex C
Other components
Complex C specific factors
111408771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_occluded
RRM_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
111408771
NCBI-ProteinID:
XP_022894311
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Position
14:complement(2429987..2434352)
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AA seq
638 aa
AA seq
DB search
MAAMEPVQPPAVQNQSATMAASLIGVTPPSTPQIATAAVGAGGFSNSSLYVGDLEATVDE
SKLYDLFNQVAPVISVRVCRDQARRTSLGYAYVNFGTYQDASHAREVLNFTPINGKPIRI
MFSHRDPFLRKTGRANIFIKNLDDSIDNKALYDTFAVFGTVLSCKVAVDNSGCSKGYGFV
QFDQEEAAQNAIRRLNGMLINDKQVYVGTFVRRQERNSVDGSPIFTNVYVKNFSETTMEV
DLKKTFGKFGSITSAVVMKDTNGKSRCFGFVNYEHPEAAAAAVENLNGSLLEDKVLYVGK
AEKKVEREAKLRAKFEQERISRYEKLKDTNLYLKNLDDGMNDEKLKELFSEFGTITSCKV
MLDQNGVSKGAGFVAFSTPEEATKALSEMNGKMIGRKPLYVAVAQRKEERKAWLQAHFAQ
MRAPVGMLPLPAMPGFHLGAARFSPQQLYFGQVGPVMPPQAVGYGFQQQHVPGVRAGPPN
FVMPFRHQRQGPPGQHVGPRRVGNTQHQQQVQRNLNQGFSRYMINGRNGIDPPIVPTTTS
SSIQPAGPVSSSTLASALASATPENQQMMLGEQLYPLVERVECNLAGKVTGMLLEMDQTE
VLHLIESPDALRKKVGEAMDVLQSVASSDTGDNLGSLS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatggaacctgttcagccaccggcggttcagaatcagtctgcgactatggcg
gcgagtttgataggagtgacgccaccgtcgactccgcagatagcgacggcggcggtaggg
gccggaggtttctcgaactcgtctctatatgtaggtgatctagaggctacggtggatgag
tcgaagctgtacgatttgttcaaccaggtggctcctgtgatctcggttagggtttgtagg
gatcaggctcgcaggacctcccttggctatgcctatgttaatttcggcacttatcaggat
gcatctcatgcaagagaggttttgaattttacccctatcaatgggaagcctattaggatt
atgttttctcatcgagatccttttctgaggaaaactggacgtgctaatattttcataaaa
aacttggatgattcaattgataacaaggcactgtatgacacttttgctgtctttgggaca
gtgctttcatgcaaggtagctgttgacaacagtggttgttcaaaaggttatggtttcgta
cagtttgatcaggaggaagctgcacaaaatgcaatcaggcgacttaatggcatgttgatt
aatgataaacaagtatatgttggcacttttgttcgtcgacaggaacgaaatagcgtggat
gggtcaccaatatttactaatgtttatgtgaaaaacttctctgaaactactatggaggtg
gaccttaagaaaacttttggaaagtttggttccatcactagtgcagttgttatgaaagac
acaaatggtaaatccagatgttttggcttcgtaaattatgaacacccagaagctgcagct
gctgctgttgagaacttgaatggatcattattagaggacaaggttttgtatgttggaaag
gctgaaaagaaagttgaaagagaggcaaaattgagagccaaatttgaacaagaaagaatt
agtagatatgagaaattgaaagatacgaacttatacttgaagaatcttgatgatggcatg
aatgatgaaaaactgaaggagttattttcagagtttggaaccatcacatcgtgcaaggtc
atgcttgatcaaaatggagtgagcaagggtgcaggttttgtggccttttccactccagaa
gaagctacgaaagctttgagtgaaatgaatgggaagatgattggaagaaaacctctatac
gttgctgttgctcagcggaaagaagaaagaaaggcttggcttcaggcgcattttgctcag
atgcgagcacctgtggggatgttacctttacctgcaatgcctggatttcaccttggtgca
gctaggttttccccacagcagctctattttggtcaagttggtcctgtgatgccacctcag
gctgttgggtatgggtttcagcagcagcacgtgcctggagtacgtgcaggtcctccaaat
ttcgtcatgcctttccgacatcaacgacaaggaccacctggacagcatgtgggtccgagg
agagttggaaacactcaacaccagcaacaggtgcagcgcaacttaaaccaaggttttagc
agatacatgatcaatggacgaaatggcatagatcctcccatagtcccaacaacaacttcc
tcaagcattcagcctgcagggccagtgtccagttcaacacttgcttctgctttggcttct
gctactccagaaaatcagcaaatgatgctaggtgaacagctttatccccttgtggaacgt
gttgaatgcaatcttgcaggaaaagtgacggggatgttgttagagatggaccaaacagag
gtgcttcaccttattgagtctccagatgctctgaggaagaaagtgggcgaggctatggat
gttcttcagtcagttgcatcatctgacactggcgacaaccttggttccttgtcctaa
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