Olea europaea var. sylvestris (wild olive): 111409276
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Entry
111409276 CDS
T05244
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111409276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111409276
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111409276
Spliceosome [BR:
oeu03041
]
Complex A
U2 snRNP components
U2 related factors
111409276
Complex B
111409276
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
111409276
NCBI-ProteinID:
XP_022895066
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All DBs
Position
14:complement(15019223..15023358)
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AA seq
1140 aa
AA seq
DB search
MEESKHKSKREGSEKEESKRSHRDRDDKDRGKERNGERQRDREREREKSVDDKYREKEKH
KERRKEKEMKKDRDKAKDRERDREDREDREREREKERRREREREREEREREKERERERDR
ERERKERDRERERERREREREEREREREREREREKIRDRGRRHELDRAHSSGDDDDVMDR
ERKRRRREDDNKNRDRERSSKSNRRRDDREGSSPPKRGDEDSTDRKEKTWEEDLAEEQER
LDDEMEKRRRRVQEWQELRRKKEESEREKLGITANVDEPKSGKTWTLEGESDDEEAGIEG
KTDMDVDESGSAKPMDEDVNGLSLDLKNEVVSASQNGVSDAVVDDEIDPLDAFMNSMVLP
EVNKLNDLVPSGSTDTSQMVDKYGEANGEYPKKKGAGKLMGRIIPGENSDSDYGDVENDE
DPSEDEDDEEFMKRVKKTKVEKLSIVDHSKIEYPSFRKNFYIEVKEISRMTSEEVSAYRK
QLELKIHGKDVPKPVKTWHQTGLSTKILETIKKLNYERPMPIQAQALPVIMNGRDCIGIA
KTGSGKTLAFVLPMLRHIKDQPPLMPGDGPIALIMAPTRELVQQIHSDIKKFTKVMGLSC
VPVYGGSGVAQQISDLKRGTEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMDEADRMFD
MGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLDKPVEMQVGGRSVVNKDITQL
VELRPESDRFFRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQT
DRESTISDFKANVCNLLIATSVAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRK
GCAITFVSEEDARYAPDLLKALELSEQVVPADLKALADGFMAKVNQGLEQAHGTGYGGSG
FKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDEGIRKAGGEISHQAVLAQAAALAAA
SKVSAASTPISAAQLIPNGALPVSLPGVLGLTMPGIASAVPGTGLPGGSGDAAARAAALA
AAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQ
YFAPGRVPGPGERKLYLFIEGPTEQSVKRAKAELKRALEEITMQASSLPSSAQPGRYSVL
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtcaaagcataaatctaagagagagggttctgaaaaagaagaatcgaagagg
agtcaccgagacagggatgataaagatcgtggaaaagagagaaatggtgagaggcagagg
gatagggagagggagagggaaaagagtgttgatgataagtatagagaaaaagaaaagcac
aaggagaggcgcaaagagaaggaaatgaaaaaggacagagacaaggccaaagacagagag
agggatagggaagatagagaagatagagagagagaaagggagaaggaaaggcggagggaa
cgagagagagagcgggaggaaagggagagggagaaggaaagggagagggaaagagacaga
gagagggagaggaaggagagggatcgagaaagagagagagaaaggagggagagagagagg
gaagagagggagagggagagggagagggagagggagagggagaaaatacgagataggggg
agacgtcacgaattggatcgggcacacagtagtggtgatgatgatgatgttatggatcgt
gagagaaaaaggcgtaggagagaggatgataataagaacagggatcgtgaacgaagcagc
aagtccaacaggcgtagggatgatcgtgagggcagtagccctccaaaacggggtgacgaa
gactcaacagacaggaaagagaagacttgggaagaagacttggccgaagaacaagagaga
ttggatgatgagatggagaagaggaggaggagagtacaggaatggcaggagctacgaaga
aagaaggaggaatctgagagggaaaaacttggaattactgcaaatgtggatgaaccaaag
tctggtaagacatggacactggaaggagaatccgatgatgaagaagctggcattgagggg
aaaactgacatggatgttgatgagtctggatctgccaagccgatggatgaggatgtgaat
gggttgtcccttgacctcaagaatgaggttgtatctgcttctcagaatggagttagtgat
gctgttgtggatgatgaaatagatccattagacgctttcatgaattcgatggtattgcct
gaagtcaataagctgaatgatctcgtgccttctggttccactgatacaagtcaaatggtg
gataaatatggtgaggccaatggggaatatcctaaaaagaagggtgctggtaaattgatg
ggaagaatcatccctggggaaaattctgattcagattatggggatgttgagaacgatgaa
gatccttcggaggatgaagatgatgaagagttcatgaaaagggtgaagaaaaccaaagtt
gagaagctatctattgttgatcattctaaaattgaatatccttcctttcgaaagaatttc
tatattgaagttaaggaaatctcaagaatgacttctgaagaggtgtctgcatataggaaa
caactggaacttaagatacatggaaaggatgttccaaagcctgtcaagacctggcatcag
actggattatcgaccaaaatattggagacaataaagaagctaaattatgaaagacctatg
ccgattcaagcgcaggcgctgccggtaattatgaatggtcgagactgcattggtattgca
aagactggctcaggcaaaactctagcgtttgtgttgccaatgttgagacatataaaggac
cagcccccgttgatgcctggtgatggtcctattgcgcttataatggctcctacaagagag
cttgtccagcaaatccacagcgacatcaagaaatttacgaaggtgatgggtctcagctgt
gtgcctgtatatggaggttctggtgttgcccagcagattagtgacttgaaacgtgggacc
gagattgttgtttgtacacctggtagaatgattgatatactttgtaccagtgctgggaag
attacaaatctgcgccgggtcacttacttggtcatggatgaagctgatcgaatgtttgat
atgggttttgaacctcagatcacaagaattgtccaaaatacacgaccagatcgtcaaact
gtactcttctctgccactttccctcgtcaagttgaaattctggctcgcaaagtgttggac
aaacctgttgagatgcaggtaggtggtaggagtgtcgtgaacaaggacataacccaatta
gttgagttaagaccagaaagtgataggttcttcaggctcttagaattactaggagaatgg
tacgagaaggggaaaattttgatatttgtccactcacaggagaaatgtgatgctttattt
agagatttacttaagcacggatatccgtgcctctcgcttcatggggcaaaggatcagaca
gaccgtgaatccactatatctgatttcaaggctaatgtgtgcaatttactaattgcaaca
agtgttgctgcaagaggattagatgtaaaggagctcgaattagttatcaactttgatgtt
ccaaatcattatgaggactatgttcatcgtgttggtcggaccggtcgagctggtcggaaa
gggtgtgctattacatttgtatctgaagaagatgcaagatatgcaccagatcttttgaaa
gcccttgaattatctgagcaagttgttcccgctgatctgaaagctctggctgatggcttt
atggcaaaggtgaaccaggggcttgagcaagcacatgggactggttatggtggtagtggt
tttaaattcaatgaagaggaggatgaagttaggagagcggcaaagaaagcacaggcaaag
gaatatggatttgaggaggataaatcagattcagaagatgaagatgaaggaatcagaaag
gcaggtggtgaaatttctcaccaagctgtccttgctcaggctgctgctttagctgctgcc
tccaaagtgagtgcggcatcgacaccaatctcagctgctcagcttattcccaatggtgca
ttacctgtttccttgcctggtgtccttgggttaacaatgccaggtatagcctcagctgtc
ccagggactggactgccaggtggaagtggcgatgctgctgctagggctgcggcactggcg
gctgccatgaatttgcagcataacttagcaaagattcaggctgatgctatgcctgaacat
tatgaagcagaattggagataaatgattttccacaaaatgctcgatggaaggtgacccac
aaggaaactttgggtccaatctctgaatggactggggctgccatcacaactagagggcag
tattttgcacctggcagggttccaggaccaggtgaacgaaagctgtacttgttcattgag
ggcccaactgagcaatctgtcaagagggcaaaagctgaacttaaacgtgccttagaggaa
atcacaatgcaagcttcatcacttcctagttcagcgcaacctggccgatattcggttctt
taa
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