Olea europaea var. sylvestris (wild olive): 111410915
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Entry
111410915 CDS
T05244
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111410915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111410915
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111410915
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111410915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
111410915
NCBI-ProteinID:
XP_022897278
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Position
15:complement(957502..958946)
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AA seq
235 aa
AA seq
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MNTEFFEVIYHYLELHLSNLPPSQNYSIMKKNVDAMKLIQMGLTLFDPQGYIPDFGIEFC
FIWKFNFMEFSIDKDLQNSKSIALLRRQGIDFTKNKLIGISSADFAFLFLAFQLSIATRW
LGGNQTWITFHSTYDFGFLKTYFNGPTKELLNAFNYKLFDPQGNLPDFGIEFCFIWKFNF
IDFGVDEDLQSPKSIALLKRQDIDYSMNKLIGISSADFAFLFMASRLSIATRWLR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgagtttttcgaagtaatttaccattatcttgagctccatctctcgaatctt
cctccctcacaaaactactcaatcatgaaaaaaaacgtagatgctatgaaactcattcag
atgggcctcacgttattcgatccacaaggatatattcccgactttggtattgaattctgc
ttcatctggaagttcaattttatggaatttagcattgacaaagatctccaaaactcgaaa
tccattgctctgcttaggcgccaaggcatcgattttaccaagaacaagctaataggaata
agttctgcggactttgccttcttgtttttggcttttcaactttcgatagcaacgagatgg
ctgggaggaaatcagacatggataacttttcacagcacatatgatttcggattcttgaag
acttatttcaatggtccaacaaaggagttgctgaatgcatttaattacaagttattcgat
ccacaaggaaatctccccgactttggaattgaattctgcttcatctggaagttcaatttc
atagactttggtgtggacgaagatctccaaagcccaaaatccattgctctgcttaagcgc
caagacatcgattattccatgaacaagctgataggaataagttccgcggactttgccttt
ttgtttatggcttctcgactttcgatagcaacgagatggctacgatga
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