Oxalobacter formigenes: BRW83_2026
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Entry
BRW83_2026 CDS
T04835
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ofo
Oxalobacter formigenes
Pathway
ofo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRW83_2026 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ofo03400
]
BRW83_2026 (xthA)
Enzymes [BR:
ofo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BRW83_2026 (xthA)
DNA repair and recombination proteins [BR:
ofo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BRW83_2026 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ARQ46764
LinkDB
All DBs
Position
2164111..2164878
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AA seq
255 aa
AA seq
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MKIATWNVNSLKVRLPHVLQWLEDNPVDVLCLQETKLTDDKFPVMEIGAAGYQVAFTGQK
TYNGVAILSKKPVTDIVKNNPLFPDEQQRIVAATVDNIRIVCAYVPNGQAVGSEKYSYKL
DWLRSLTQWLAEERQKHPYLALLGDYNIAPEDRDVYDPVAWEGNVLVSPPERDAFRALQD
IDFIDAYRLFEQPEKSYSWWDYRQLGFQKNRGLRIDHILLSKALAPHCTACTIDRIPRKW
TQPSDHTPVIAELDI
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagctacatggaacgtcaactcgctcaaagtccgcctgcctcacgtattgcag
tggctggaagacaatcccgtcgatgtcctctgccttcaggaaacgaaactgacggacgac
aagtttcccgttatggaaatcggggcagcgggttatcaggtggctttcacaggacagaaa
acctataacggcgtcgctattctttcaaaaaaaccggtaacggatatcgtcaaaaacaat
ccgcttttcccggatgagcagcagcgcattgttgccgcaactgtcgacaatatccgcatc
gtctgtgcctacgtccccaatggacaggcggttggatcggaaaaatattcgtacaaactg
gactggctgcgttccctgacccaatggctggcagaagaacggcaaaaacatccatatctg
gcactattgggtgactacaatatcgcgccggaagaccgcgacgtttacgacccggtggca
tgggaaggcaacgttctcgtttcgccaccggaacgggatgctttccgggcattgcaggac
atcgatttcatcgacgcttaccgtcttttcgaacagcctgaaaaatcatacagctggtgg
gattaccggcagctgggtttccagaaaaaccgcggattgcggatcgaccatatcctgctg
tccaaagcgttggcaccacattgcacggcatgcacaatcgaccgcattcctcgcaaatgg
acacagccttctgaccatacgccggtcattgccgaactggatatctga
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