Ostrinia furnacalis (Asian corn borer): 114353546
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Entry
114353546 CDS
T07986
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03022
Basal transcription factors
ofu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114353546
09124 Replication and repair
03420 Nucleotide excision repair
114353546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ofu03021
]
114353546
03400 DNA repair and recombination proteins [BR:
ofu03400
]
114353546
Transcription machinery [BR:
ofu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114353546
DNA repair and recombination proteins [BR:
ofu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114353546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
114353546
NCBI-ProteinID:
XP_028161389
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MSESSKSKSSLNLNPSPTLQYKDLHEYLKSRTPQFLETLYNYPTICLAVYRELPELARHF
VIRLLFVEQPVPQAVVTSWVSQTFAKEQNKACEALSELSVWQEAPIPGGMPGWMLAQSFK
KNLKVSLLGGGRPWSLSSSLEPDGKARDVAFLDAYALERWECVLHYMVGSTQTEGISADA
VRILLHAGLMTRDAEDNSAVITRAGFQFLLLSTPKQVWLFLQHYLLTAEKRSMSAAECLA
FLYQLSFSTLGKDYSTEGMSNNMLVFLQHLREFGLVYQRKRKAGRFYPTRLALNIARVRD
TGAAPAGRAGYLVAETNYRVYAYTQSNLQVALLGLFTELVYRFPNLVVGVLTRESVRMAL
RGGITADQLIHYLEQHSHPQMLQTETGGIRSSGVLPPTVVDQVRLWETERNRFSYTDGVI
YNQFLSSADFVVLRDYAKSAGVLTWESERTRTMVVTRAGHDDVKKFWKRYSKSS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtcatcaaaatcgaaatcttcattaaatttaaacccgtcgcctactttgcaa
tataaagatcttcatgaatacctgaaaagtcgaactccacagtttttggaaacactatac
aactatcctacaatttgtttggcagtataccgggaactgcctgaacttgctcggcacttc
gtaatacgcctgctattcgttgaacagcctgtgccacaagcggtggtaacatcgtgggta
tctcaaacctttgccaaggaacagaataaagcatgtgaggccttatctgagctgtcagta
tggcaagaggcacccattcccggtggaatgcctgggtggatgctggcgcagtctttcaag
aagaatttgaaggtttctcttttgggaggcggacggccgtggagcctctcgtcttccctg
gagccggacggcaaggcgcgcgacgtggcgttcctggacgcgtacgcgctggagcgctgg
gagtgcgtgctgcactacatggtgggcagcacgcagaccgagggcatcagcgccgacgcc
gtgcgcatcctgctgcacgccggcctcatgaccagagacgctgaagataattccgcagtg
ataacacgcgctgggtttcaatttctgctattgagtactccaaaacaggtgtggctgttc
ctgcagcactatctgctgacggcggagaagcgctccatgagcgccgccgagtgcctggcc
ttcctctaccagctcagcttcagcactttgggaaaggattacagtacagagggaatgagc
aacaacatgttagtatttttgcaacacttgagagagttcggactggtttaccaaaggaag
cgcaaagccggtcgcttctacccgacgcggctggcgctgaacatcgcgcgcgttcgcgat
acgggcgcggcgccggcgggacgcgcggggtacctcgtggcggagaccaactaccgcgtg
tacgcctacacgcagtccaacctgcaggtggcgctcctcgggctcttcaccgagctcgtc
tacaggttcccaaatctcgtggtgggcgtattaactcgtgagtcggttcggatggcgctt
cgcggcggcatcacggctgatcagctcatacactacctcgagcaacactcgcatccgcag
atgctgcagacggagaccggcggcatccgcagcagcggcgtgctgccgcccaccgtggtg
gaccaggtgcggctgtgggagaccgagcgcaaccgcttcagctacaccgacggcgtcatc
tacaaccagttcctgtccagtgcggacttcgtggtactgcgggactacgccaagagcgcg
ggagtactaacgtgggaaagcgagcggacgcgcaccatggtcgtgacgcgcgcgggacac
gacgacgtcaagaagttctggaagcgatactccaagagctcgtag
DBGET
integrated database retrieval system
