Ostrinia furnacalis (Asian corn borer): 114353635
Help
Entry
114353635 CDS
T07986
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ofu
Ostrinia furnacalis (Asian corn borer)
Pathway
ofu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ofu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114353635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ofu03400
]
114353635
Enzymes [BR:
ofu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
114353635
DNA repair and recombination proteins [BR:
ofu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
114353635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
TPR_14
RNA_ligase
DNA_ligase_IV
BRCT
TPR_19
TPR_8
TPR_1
TPR_6
NatA_aux_su
BRCT_2
TPR_12
BTAD
Motif
Other DBs
NCBI-GeneID:
114353635
NCBI-ProteinID:
XP_028161495
LinkDB
All DBs
Position
Unknown
AA seq
1327 aa
AA seq
DB search
MDLALPGSSSMDMEIDINPEKDLTSKFLNGEMSFAEYSSEWYDVEDEEDIDDTSKPSDED
RLSPSAHFMEKGTLRRRKCTRLSPALMGLMGEANLRFVRGDKEMAEKMCHEIIKQVPTAP
EPYQTLAQIYEHDAEKSLQFSLLAAHLRPSDANEWLRLANISNQKNDTRQEMLCYTQAVR
ADPHNLDIHLKRLEVLSILEDMKYPVHTMNVSRVKCYHKIVTSLPASEGEVIMKYAKMAA
TLYHNSNEVERSLEVMGAAYKKCSSLFTHEDLNILLELLILRKQYQTCLDIFVANVGVEI
EAEIQTVKNSDNDAIEEHTNYLNCSIPENLHIDLKSKLLVCFIHLGSINLVQTLLQDFLS
NDVEKAGDLYMDIEEALSSAGYHELAMKLLDPLVKNNSFDLGAVWLKHAECLHNLGREDD
AIESYYKVLKHVPQHPDARRKLFTILEKKGKIDEALNILQQDYRYIVSASLLYEQCLALK
KYNRLLKYLENTNLYPILRLLLPKYERERSPYNMKETKLAQLLVRVLSLSKQSPAAKRLI
NFRSVSNTQDSDFAGVAYYALKGILGKNKGDLTVEDINTILDKIATAEVGNKARVLNEAF
GYAIRHLTPEQLKWFLRLILKDLKLGIETKRILAAFHPDAPEYFETCNSISKVCEELEDG
DIRPLEMGVKMFYAISPMLSERLDVTEIHRQLFFDGTTYIVENKFDGERFQIHMENGIFE
YFSRKGHKYSDNYGKTYESGLLTPFLKDCFNPEVESFIIDGEMMGWHKANHYYSSKGISF
DVKKITVRSVFRPCFCAFDVLYYNGKALVGSAERGGVPLKERLEILDSMFTDVTGVIQHS
RRETVKDSTDVLNKLNEAIENQDEGIVVKDVESYYLPSRRNAGWYKVKPEYTEGTMDDLD
LVIIGADEAENKKQGRAKSFHVACLDVTGGADAPRWVSVGRVATGLSFDERERLCVALER
RWVPAADAPPPPELDFNKEKPDFWVMPEHSTVLQVRATELIQSVGFGTDYTLRFPRVVKI
RDDKPVRDVMTLEEFNALVSNKGPVVKLSSTQVRKESMGEGRSLRKRVAKTVKVADQFVT
TPSSSVEVVSKALLGRKVCILSDDDDCKKLELRNIVESHGGTFVSNIGPDTWCAVVGRIT
RRENEIIKSQEVDVTTTAWLRSLPRSESPCILPPLETLAMKKATRLAMSNDYDCFGDSYT
EPIDEATLRKCFEKMDRNEPQIYLTNREMLSLDRELFGASNPHSFLRACSLHVACRSGAR
ASQAAMRGAARADVLSPALTHVVLPADAPRAEVARLKRKLTATIVSENWLEACFAAKALV
PEDEFIL
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggatttagcattacctgggtcttcttcaatggatatggaaatcgatatcaatcctgag
aaagatttaactagcaaatttctaaatggtgaaatgtcgtttgccgaatattcaagcgag
tggtatgatgttgaggatgaagaggatattgatgatacaagtaaaccaagcgacgaggat
cgtttatcgccttctgcccattttatggaaaagggcacacttcggcgtcgtaagtgcaca
cgactatcaccagctctgatgggtttgatgggtgaagccaatttaagatttgtaagaggt
gacaaagaaatggcagagaaaatgtgtcatgaaattattaaacaagtgcctacggctcca
gaaccatatcaaacacttgcacaaatatatgagcatgatgctgaaaaatcacttcagttt
tcattgttagctgcacatctccgtccatcagatgctaatgagtggttgagactggcaaac
atttccaatcaaaaaaatgacaccaggcaagaaatgctgtgctacactcaagcagtcaga
gctgatcctcataatttagacattcatttgaaaaggcttgaagttttatctattttggaa
gatatgaagtaccctgtgcataccatgaatgtcagccgtgtcaaatgctatcacaaaata
gtgacatctctgcctgcaagtgaaggagaagtgatcatgaagtatgctaaaatggctgca
actttgtaccacaatagcaatgaggttgagagatctcttgaagttatgggtgctgcatac
aaaaaatgctcctctctctttacccacgaagatttgaatatacttttggagctgctaatt
ttacgaaaacaatatcaaacatgcttagatatatttgtagctaatgttggtgtggagatt
gaagctgaaatacaaactgtaaaaaattctgataatgatgcaattgaagaacacacaaat
tacttgaactgttctattccagaaaacttgcatattgatttgaaaagcaaattactagtt
tgtttcatacatttagggtctattaatttagttcaaacccttttacaagattttttatct
aatgatgtggaaaaggctggtgatttatacatggatatagaggaagctctatcttctgct
ggctaccatgagttagctatgaaactattggatcctttagttaaaaataatagtttcgat
cttggcgctgtttggcttaaacatgctgaatgtcttcataacttaggaagagaggatgat
gccattgaatcatattataaagttctaaagcatgttcctcagcatccagatgcccgtcga
aaattatttaccattttagagaaaaagggaaaaattgatgaagcactgaatattttgcaa
caagattacagatacattgtcagtgctagcttgctttatgaacaatgtttggcattaaaa
aagtataaccgcttacttaaatacttagaaaatacaaatttgtatccgattttgaggttg
ttattgcctaaatatgaaagagaaagaagtccatataatatgaaagagactaaacttgcc
caattactcgtcagagtgttgtctctaagcaagcagtcgccagccgctaaaagattaatt
aactttagatcagtaagtaatactcaggatagcgattttgctggtgtggcatattacgct
ctaaaaggaattcttggtaaaaacaaaggcgatcttactgtggaggatatcaacacaata
ctggataaaattgccacagctgaagttggaaacaaagcacgggttctaaatgaagcattt
ggatatgctattagacatttaacacctgaacagttaaaatggtttttgagacttatcctc
aaggatttgaaacttggtattgaaacgaaacgtattttggctgcctttcacccggatgct
cctgaatattttgagacttgcaatagcatttctaaggtgtgcgaagaattagaagatgga
gacatacgtcctttagaaatgggtgttaaaatgttttatgcgattagtcctatgctctcc
gaaagattggacgtcacggagatccatcgacaactcttttttgatggcacaacttatatt
gtggaaaataagtttgacggggaaagatttcagattcatatggaaaacgggatatttgag
tatttttcaagaaaaggccacaagtattctgataactacggtaagacatacgagtctggc
ctactgacaccattcctcaaggactgttttaacccggaggtggagagtttcattattgat
ggggagatgatgggatggcacaaagcgaatcattattatagttctaagggtatatcattt
gatgtcaaaaagataacagtcagatcagtgttccggccttgtttttgtgcatttgacgtc
ttatattacaatggcaaagcgttagtgggatccgcagaaagaggaggagtaccactcaag
gaaagactggagatcctagactccatgttcaccgatgtgacgggagttatccagcacagc
cggagagaaactgtcaaagatagcaccgatgtattgaacaagctaaatgaagctatagag
aatcaagatgaagggatcgtggtgaaagatgtggaatcatactacctgcctagtcgacga
aacgctgggtggtacaaagtgaaaccggagtatactgaaggaactatggacgatctcgac
ctcgtaataattggagctgacgaagctgaaaataagaaacaaggtcgagccaagagcttc
catgttgcttgcctcgacgtcacaggaggagccgatgccccgcgctgggtgtcggtgggc
cgcgtggccaccgggctgtcgttcgacgagcgcgagcggctgtgcgtggcgctggagcgg
cgctgggtgccggccgccgacgcgccgccgccgcccgagctcgacttcaacaaggagaag
ccagacttctgggtgatgccggaacattccacagtattacaggttcgcgccaccgaactc
atccaaagcgtgggcttcggcaccgactacacgctgcgcttcccgcgcgtcgtcaagatc
cgcgacgacaagcccgtccgtgacgtcatgaccctcgaggagtttaatgcactcgtctcg
aacaaaggaccagttgtgaagctgagctcaactcaagtgcggaaggaatcgatgggcgaa
gggagaagcctcagaaagcgcgtcgctaaaacagtgaaggtggcggaccaattcgttacc
acgccttcgagctcagtggaggtggtctccaaggccctgcttggcaggaaagtgtgcatc
ctgtcggacgacgacgactgcaagaaactagaactgaggaatattgtagaatcgcacggc
gggactttcgtttcaaatataggtccagacacctggtgcgcagtggtcggtcggatcaca
agaagggagaacgagataatcaaatcccaagaagtggacgtaaccaccacggcctggctg
cggtctctaccgcgctcggagtcgccgtgcattctgccaccgcttgaaacgctcgccatg
aaaaaggcgaccagacttgctatgagcaatgattacgattgcttcggcgacagctacacc
gagccgatagatgaggctactttgcggaaatgctttgagaagatggatagaaatgagccg
caaatctacctgaccaatcgcgagatgctgagcctggaccgcgagttgttcggcgccagt
aacccgcactcgttcctgcgcgcctgctcgctgcacgtggcgtgccgcagcggcgcgcgc
gcctcccaggccgccatgcgtggcgccgcgcgcgccgacgtgctatcgcccgcgctaacg
cacgttgtattgccggctgacgcgccgcgtgctgaggtggcgagactaaaacgcaagctt
acagcgacgattgtgtccgagaactggctggaagcctgcttcgcggctaaggcgcttgtg
cctgaggatgagtttatactgtaa
DBGET
integrated database retrieval system
