Otolemur garnettii (small-eared galago): 100946254
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Entry
100946254 CDS
T07855
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03013
Nucleocytoplasmic transport
oga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100946254 (UPF3A)
03015 mRNA surveillance pathway
100946254 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100946254 (UPF3A)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100946254 (UPF3A)
mRNA cycle factors
P-body specific factors
100946254 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
100946254
NCBI-ProteinID:
XP_012666985
Ensembl:
ENSOGAG00000004788
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MRSAERAGGLETTVAARSPCGTDKLSTPDGQFRRESPRREPETLPASFLSCGGGVGKPRE
EKKTALSKVVIRRLPPGLTQEQLQEQLRPLPAHDYFEFFSADLSLYPHLYSRAYINFRNP
DDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKIAKKKPKKKDAKTGSIEDDPEYKKFL
ETYCVEEEKAIANPETLLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRR
RELEKKRLREEEKRKRREEERYKRKEEDKQKKTTEKEIRIKLLKKLEKGEEPTTEKPRER
EEIDVGDGKHEARAACTVAKAGPLESCLEEPREKSQNVSDKEHRDMDRRSREKEPEAQRQ
LTDDNRKHRAHRQLGGLSGRSEDEPRWAKASAPDREREVGWPARQRPRGGRRETQKRAEV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctgcagaaagggccggaggcctggagacgaccgttgccgcgcggagcccgtgc
gggacggacaagctctcaaccccagacggtcagttccgccgtgagtcgccgcggcgagag
cctgagacactgccagcctcattcttgagctgtgggggcggtgtaggcaaacctcgcgag
gaaaagaagacggccctaagcaaggtggtcatccggcggcttccccctggtctcacccag
gagcagctgcaggagcaactgcgcccgctgcccgcgcacgactatttcgaattcttctcg
gctgacctcagtctttatcctcatctctactcaagagcatacattaattttagaaatcct
gatgacatccttctttttagagatcgttttgatggatatatcttcattgacagtaaaggt
ctggaatatcctgctgtggtagagtttgctccgttccagaagatagccaaaaagaagcct
aagaaaaaagatgccaagaccgggagcatcgaagatgatccagaatataagaagttttta
gaaacttattgtgtggaggaagagaaggccattgccaaccctgaaactctcctgggagag
atagaggcaaaaacgagagaactcattgctagaagaaccacacctcttttggaatatatt
aaaaatagaaaattagaaaagcagagaattcgagaggagaagcgagaagagcggagaagg
agggagttagagaagaaacgtttgcgggaagaggagaaaagaaaaagaagagaagaagaa
aggtataaaagaaaagaggaagataaacagaagaaaactactgagaaagagataagaatt
aagcttcttaagaaactggaaaagggagaggaaccaaccacagagaaacccagagaaaga
gaagaaattgatgttggagatggaaaacacgaagcccgtgctgcttgtacagttgcaaaa
gctggacccttggagagctgcctagaggagcccagggagaagtcacaaaatgtcagtgac
aaagagcacagggacatggacagaaggtctcgagaaaaagaaccggaagcacaaagacag
cttacggacgacaacaggaagcacagagctcaccgccagctgggcgggctctcggggagg
agtgaagatgagccaagatgggcgaaagcatctgccccagacagagagagggaggtaggg
tggccagcacggcagcgcccccggggaggccgcagagagacccagaagagggcagaggtg
tga
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