Otolemur garnettii (small-eared galago): 100952023
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Entry
100952023 CDS
T07855
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100952023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oga03041
]
100952023
Enzymes [BR:
oga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100952023
Spliceosome [BR:
oga03041
]
Complex A
U2 snRNP components
U2 related factors
100952023
Complex B
100952023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
100952023
NCBI-ProteinID:
XP_003781303
Ensembl:
ENSOGAG00000034921
UniProt:
H0XJN0
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MGRESRHYRKRSASPRRSGRRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSPSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNRSKKAENRSRS
KEKTDGGERSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDEDEDEDDPAKAETEGSDMEGEELDPLDAYMEEVKEEVK
KFNTRSVKGGGGNEKKSGPTVTTVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQWSSEEGEGPIAVIMTPTRELTLQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKTSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSQKRVKDVAAPGTASVPA
PTAGHAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEERQDGGQNESFKRYEEELDINDFPQTARWKVTSKDALQRISE
YSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSY
QPTNKGRYKVL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgccactatcggaaacgatcagcatccccaagacgctctggacgt
cgatctagaagtcgctcaccctcagacaaaagaagtaagcgtggagatgacagacggtct
agaagtagagatagagatagaagaagagagagatctcctagcagggataaaagaagatct
cggtcaagggacaggaaacgtttgagacgttccagaagtagagaaagagacagaagccga
gagcgaagacgatctcgaagtagagacaggagacgctcaaggagtagaagccggggccgc
cgatcccgatcctccagtcctggcaacagaagcaagaaagctgaaaacagatctaggtcc
aaagagaaaacagacggtggggaacgttctaaagagaagaaaaaagacaaagatgacaag
gaagatgaaaaagaaaaagatgctggcaactttgaccagaataagctggaagaagaaatg
agaaagcggaaagagcgagtagagaaatggcgtgaggagcaacgtaaaaaggccatggaa
aacataggagaactgaaaaaggaaattgaagagatgaaacaagggaaaaaatggagttta
gaggatgaggatgaggatgaagatgatcctgccaaagctgagacggaaggaagtgacatg
gagggtgaggagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaa
aagtttaacacgagaagtgtgaaaggtggtggtggaaatgaaaagaagtctgggccaacg
gtcacaacagttgtcactgttgtgaccacgaagaaagcagttgtagattctgataagaag
aaaggtgagctgatggagaacgatcaagatgccatggagtactcgtcagaggaagaagaa
gttgatcttcagacggcccttacaggttatcagaccaaacaaagaaagctgctagaacca
gttgatcacggaaaaattgaatatgaaccattcagaaaaaatttttatgttgaagttcca
gaactagcaaaaatgtctcaagaggaggtgaatgtatttcgactagaaatggaaggcatt
acagttaaaggaaaaggttgccccaaaccaattaaatcttgggtccagtgtggcatttcc
atgaagatcttaaattccctaaaaaagcatggctatgaaaagcccacaccaatccaaact
caagcaattcctgctataatgtctggacgagatttgattggtattgctaagactggaagt
ggaaagaccattgcttttctgttgcctatgtttaggcacatcatggatcagtggtcatcg
gaagaaggagaggggccaatagctgtcatcatgactccaactcgagaactgactttacag
attactaaagagtgtaagaagttttcaaagaccttgggacttagagtggtctgtgtttat
ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggccgggtcacaaatctt
cgaagagtaacatacgtagttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtcatgcgaattgtggataatgtccgtcctgaccgtcagacagttatgttttca
gctactttccccagagctatggaggctttggctcgcagaatcctgagtaaacccattgaa
gtgcaggttggaggcaggagtgtggtttgctcagatgtggaacaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagttacttgagcttttaggtcattatcaagaatcagga
tctgtcattatatttgtggataagcaggaacatgccgatggtcttctgaaggatttaatg
agggcctcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagacagc
atcattaatgactttaagaatgggacctgcaaacttcttgtggctacctctgttgctgcc
cgaggtctagatgtaaaacatcttattcttgtagtaaattatagctgccctaaccattat
gaggactatgtgcacagagcaggacggactggaagagcaggcaacaagggttatgcctat
acttttatcacagaagatcaagctcgctatgctggtgacataattaaagctcttgagttg
tcagggaccgcggtgcctcctgatctagagaaactttggagtgatttcaaagatcaacag
aaagccgaggggaaaataattaaaaagaccagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagctttggctaatgagaggaagaagttacaaaaagcggctcttggt
ctgcaagattcagatgatgaagatgccgcagttgatattgatgaacaaattgagagcatg
tttaattcacagaagagagtaaaggatgtggctgctcctggaacagcaagtgtccctgct
ccaactgcaggacatgctgagaaattagaaattgctaagagattggctcttagaatcaac
gctcagaagaatttaggcatcgagtctcaggtagatgtaatgcaacaggccaccaatgca
attctcagaggtggcaccatcctggctcccactgtgtctgcgaagaccattgcagagcaa
cttgctgagaagatcaatgccaagctcaattatgtgcctttagagaaacaagaagagagg
caggatggtgggcagaatgaatcatttaagcgatatgaggaagaattagatatcaacgat
ttcccacagactgctaggtggaaagttacttctaaggacgctctgcagagaatcagtgaa
tactctgaagctgcaattacaatcagaggaacttacttccctcctggcaaagaacctaag
gaaggagagcggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcagaaa
gcaaaggcagaaatcaccaggctcataaaagaagaactgatccggttgcaaaattcatac
caaccaacaaataaaggaagatacaaagtcttataa
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