Oryza glaberrima (African rice): 127767046
Help
Entry
127767046 CDS
T08853
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127767046
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127767046
04147 Exosome [BR:
ogl04147
]
127767046
04090 CD molecules [BR:
ogl04090
]
127767046
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127767046
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127767046
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127767046
CD molecules [BR:
ogl04090
]
Proteins
127767046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
AAA_22
AAA_16
RsgA_GTPase
AAA_30
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
127767046
NCBI-ProteinID:
XP_052148211
LinkDB
All DBs
Position
3:complement(9025565..9034576)
Genome browser
AA seq
1411 aa
AA seq
DB search
MMPTGLFGWASPHVQPLTPVSEVSEPPESPSPYGDGPAGDAGVGAREGEGLGPGEEEVED
DEVEPPPSAVSFWRLFEFADGIDWALMVAGALAAAAHGAALVIYLHYFGRSLNLLDSERV
ESALHGRSDELLHRFKEHALYIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLL
NQDMSFFDTYGNNGDIVSQVLSDVLLIQSAISEKVGNYIHNMATFVGGLVVGLINCWQIT
LLTLATGPLIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAIAYIRTLYAFTNETLAKY
SYATSLQATLRYGILISLVQGIGLGFTYGLAICSCALQLWVGRHLIARGKADGGQVVVAL
FSVILSGLGLNQAATNFYSFEQGRIAAYRLYEMISRSTSSTNQEGSTLPLVQGNIEFRNV
YFSYLSRPEIPILSGFFLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGEN
IKNLKVEWLRSQIGLVTQEPALLSLSIRENIAYGRSATFDQIEEAAKTAHAHGFISSLEK
GYETQVGRAGMALSDEQKIKISIARAVLSNPSILLLDEVTGGLDFEAEKAVQEALDVLML
GRSTIIIARRLSLIKNADYIAVMEEGHLVEMGTHDELLNLDGLYAELLRCEEATKLPKRM
PTKNGKERKSLQIEDLSASQSFQESSSPKMAKSPSLQRTHGMLQFWRSDTNKNSHDSPKD
QSPPSEQTIDNGIPLVATERVPSIKRQDSFEMKLPDLPKVDIHPIQRQSSKNSEPDSPIS
PLLTSDPKNERSHSQTFSRPQSERDDTSSEQSEPEELQHHKPPSFWRLAALSIAEWPYAL
LGTIGAAIFGSFNPLLAYTIALIVSAYYRIDVSDMHHEVNRWCLFIVGMGVITVLVNWLQ
HFYFGIMGEKMTERIRRMMFSAILRNEVGWFDKEENSADTLSMRLANDATFVRAAFSNRL
SIFIQDTAAVSVALLIGMLLGWRVALVALATLPVLVISAIAQKLWLAGFSKGIQEMHRKA
SLVLEDAVRNIYTVVAFCAGNKIMELYRLHLGKILKQSLLQGLAIGFGFGFSQFLLFACN
ALLLWYTAISVDKQRLTIATGLKEYILFSFASFALVEPFGLAPYILKRRKSLISVFQIID
REPKIDPDDNTGLKPPNVYGSIEFKNVDFSYPARPEILVLSNFNLKVSGGQTVAVVGVSG
SGKSTIISLIERFYDPVTGQVLLDGRDIKSFNLRWLRSHMGLIQQEPVIFSTTIRENIIY
ARHNATEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTAGQKQRIAIARVVLKNAP
ILLLDEASSAIESESSRVVQEALDTLVMGNKTTILIAHRAAMMKHVDNIVVLNGGRIVEQ
GTHDSLMDLNGLYVRLMQPHFGKGLRQHRLM
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgacggggctgtttggatgggcgtctccgcatgtgcagccgcttaccccggtg
tccgaggtgtcggagccgccggagtcgccttcgccgtacggggatgggccggcgggggat
gctggggtgggggcgagggaaggggaaggcctcggccccggcgaggaggaggtggaggac
gacgaggtcgagcccccgccctccgcggtgtcgttctggaggctgttcgagttcgctgac
ggaatcgactgggcgctcatggtcgctggcgctctcgccgccgcggcacacggcgctgct
cttgttatctacctccactactttggcaggtccttgaatttgctcgactctgaacgggtt
gagtctgctctccacggccgcagtgatgaactccttcaccggtttaaggagcatgctctg
tatattgtctatatagctggtggtgtgtttgctgcaggatggatagaggtgtcctgttgg
attcttactggggaacggcagactgctgtcataagatcaaaatatgttcaggtcttgcta
aatcaagacatgagtttctttgatacgtatggaaacaacggtgatatagttagtcaagtg
ctgagcgatgtattgcttattcagtcagccatcagtgagaaagttgggaactacatacac
aatatggctacatttgttggtggtcttgttgttgggctgatcaattgttggcaaataact
cttctaacacttgccactggtcccttgattgttgctgctggaggaatatctaacatattt
cttcacaggctggccgagaacattcaagatgcatatgctgaagcagctagtattgctgag
caggccattgcatacatcaggacgctatatgcttttacaaatgaaactctggcaaagtac
tcatatgctacgtctcttcaagcaactctgagatatggaatattgataagccttgtgcaa
gggattggccttggatttacttatgggcttgccatttgttcttgtgctctgcaactttgg
gttggaaggcacctgattgctcggggaaaagctgatggtggtcaagttgtggtagctttg
ttctccgtaattctaagtggccttggtttgaaccaagcagctacgaacttctattcattt
gaacaaggacgtattgctgcttatagactgtatgagatgataagccgttcaacttccagc
accaatcaagaaggctccaccttgcctctagtgcaagggaacattgaattcaggaatgtg
tattttagttatctctcccggcctgaaattccaattttaagtggtttctttctcactgta
cctgccagaaaaactgttgcacttgttggtagaaacggctcagggaaaagtagcataatt
cctctaatggagagattctatgatccaaccttaggagaagtacttttggatggggaaaat
ataaaaaatttgaaagtagaatggttgagaagccaaattggtctagtgacccaagaaccc
gcattgttgagtttgagcattcgggaaaatattgcttacggaagatctgctacctttgat
cagatagaagaggcagctaagacagcacatgcccatgggttcattagttcacttgaaaag
ggatatgaaacccaggttggtcgagctggtatggccctgagtgatgaacaaaagatcaaa
atttctattgcccgggccgtgctttcaaacccttcaattcttttacttgatgaggtcaca
ggagggcttgattttgaagctgaaaaagctgtgcaagaagcattagatgttctcatgttg
ggaaggtcaaccattataatagctcggcgtctcagcctcattaaaaatgctgattacata
gctgtgatggaggagggacatcttgttgaaatggggacacatgatgaactgctgaacttg
gatggcctttatgctgagcttttaaggtgtgaggaagcaacaaagcttcccaagaggatg
ccaaccaagaatggcaaggagcgtaagtcactccaaattgaggatctgtcggccagccaa
agttttcaagaatcatcctctcccaagatggccaaatcaccttctcttcaaagaacacat
ggaatgcttcagttttggcgatcagacacaaacaaaaactctcatgattccccgaaggat
cagagcccaccttcagaacaaactatagacaacgggatacctttggttgcaaccgagaga
gtgccatccatcaagagacaggatagttttgaaatgaaattgcccgatcttccaaaagtt
gacatccatcccattcaacgacagtcttcaaaaaattcagaacctgactcacctatatct
cctctcttaacttctgatccaaagaacgagcgatcacattcacaaacttttagtaggccg
cagagtgaacgggatgatacaagttctgaacagagtgaaccagaagagttgcaacaccat
aaacctccatccttttggagacttgcagcacttagtattgctgaatggccctatgcactt
ttaggcacaatcggtgcggctatatttggttccttcaatccactgcttgcttacacaata
gcactaatagtgtcagcatattaccgaatagatgttagcgacatgcaccatgaagtgaac
aggtggtgcttattcatagtaggcatgggtgttattacagtgctggtcaactggttgcaa
catttctattttggaataatgggagagaagatgaccgagcgcataagaagaatgatgttc
tctgcaattctgcgcaatgaagttggatggtttgacaaagaggagaacagtgctgataca
ctatccatgcgcttggcaaatgatgctacatttgttcgtgccgcattcagtaatcgcctt
tccatattcatacaagacactgctgcagtttcagtggctcttcttattggaatgctgttg
ggatggcgggttgcacttgttgctcttgcaactttacctgttcttgtcatctctgctatt
gctcagaaattgtggcttgctggcttctcaaaaggaatccaggaaatgcatagaaaggcc
tcactagttcttgaagacgcagtccgaaacatttacactgttgtagccttctgtgctggg
aacaagataatggaactatacaggttacatcttggtaagatactgaagcagagtctattg
caaggattggccataggttttggctttggattctcgcagtttcttctttttgcctgcaat
gcccttcttctttggtacactgccatttcagtggacaagcagcgactcacaattgccaca
gggttaaaagagtacattctcttttcatttgcatcatttgcattggtggagccttttgga
ctcgctccttacattcttaaaaggcggaagtctctcatttcagtgtttcaaatcattgac
cgggaaccaaagattgatcctgatgataacaccggtttaaaaccacctaatgtttacggg
agcattgaattcaagaatgttgatttctcttatccagctcgtcctgaaattcttgtgctg
agcaattttaatcttaaagtgagtggtggacaaacagttgccgtggtaggggtttcagga
tcggggaagagcactataatttctttaattgagagattctatgacccagtgactggccaa
gttctgttggatggccgagatataaaatcattcaacctgagatggttgcgaagtcacatg
ggcctaattcagcaagagccagttattttctcgacaacgataagagagaacattatttat
gcaaggcacaatgcaacagaggctgagatgaaggaagctgcgaggatagcaaatgcccac
catttcattagcagcttgccacatggctacgacactcatgttggaatgaggggggttgac
cttacagctgggcagaagcaacgaattgcaattgctagggtggttttgaagaatgcacct
attttgttgttagatgaggccagctccgcaattgagtctgaatcaagtagggtggtgcag
gaagctcttgacacattggtcatggggaacaaaacaaccatcctcattgcgcacagggca
gcgatgatgaagcatgtggataacattgtcgtcctaaatggtggtaggatagttgagcag
ggtacacatgactctctgatggacctgaatggtctctatgttagattgatgcaaccccat
tttggcaagggccttcgccagcatcggctaatgtaa
DBGET
integrated database retrieval system
