Oryza glaberrima (African rice): 127767451
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Entry
127767451 CDS
T08853
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127767451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127767451
Spliceosome [BR:
ogl03041
]
Common components
Common spliceosomal components
SR proteins
127767451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
127767451
NCBI-ProteinID:
XP_052148756
LinkDB
All DBs
Position
3:complement(9303955..9307215)
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AA seq
330 aa
AA seq
DB search
MPHYDDHYGSTRLYVGRLSSRTRSRDLEYLFGRYGRIREVELKRDYAFIEFSDPRDADEA
RYNLDGRDVDGSRILVEFAKGVPRGAAGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKA
GDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSRSPSPRRGRGHGRSRSYSRSRSRSYS
RSRSRSLSGSPRGRRDRDDRRSRSLSYSRSPRRSISRAANGKERSPSPNGRRSPRSPQDR
VSPPPKDNDERNGDSPRGRENSRSPSDGYRSPVAANGRSPSPRNNGSPSPMDNNSRSPRD
NGSPSPRDGNGDGGSRGGSRSPRASESPEA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcctcactatgatgatcattatggaagcacacgcttgtatgttggtagactgtcttcg
cgcactcgttctcgtgacctagaatatcttttcggcagatatggaagaatacgtgaagtg
gagttgaagcgcgactacgcgtttattgaattcagtgatccccgtgatgctgatgaagcg
cggtataacctagatggcagggatgttgatggaagccgcattcttgttgagtttgctaaa
ggagttccacgtggtgctgctggtggttcacgtgaatatatggggagaggacctcctcca
ggaacaggtcgctgttttaactgtgggattgatggtcactgggcaagagactgcaaggct
ggtgactggaagaacaaatgttaccgttgtggagaaagaggtcacatagaaagaaactgc
caaaacagtccaagaaatctcaggcgagagagaagttattcgcgctccccatcgccacgc
cgtggacgtggtcatggtcgtagtcgtagctatagccggagccggagcaggagttacagc
cgatctaggtccagatccctatctggatctcccaggggacgcagagatcgtgatgatagg
agatcaaggagtcttagctacagcagaagtcccaggcgatccatctcccgagcagcaaat
ggaaaggagcgcagccccagcccgaatggtaggcggagtccaaggagtccacaggatcgg
gtaagcccaccacccaaggataatgatgagcgcaatggtgacagcccccggggcagggag
aacagcaggagcccatctgacggctatcgtagccctgtggctgccaatgggcgcagccca
agcccaaggaacaatggaagccctagtccaatggacaacaatagccgaagcccaagggac
aacggcagcccgagccctagggatggaaatggtgatggtggtagccgtggcggctcacgc
tcgcccagagcaagcgagtcccctgaagcttga
DBGET
integrated database retrieval system
