Oryza glaberrima (African rice): 127767925
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Entry
127767925 CDS
T08853
Name
(RefSeq) ABC transporter B family member 21-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127767925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127767925
04147 Exosome [BR:
ogl04147
]
127767925
04090 CD molecules [BR:
ogl04090
]
127767925
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127767925
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127767925
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127767925
CD molecules [BR:
ogl04090
]
Proteins
127767925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
ABC_ATPase
AAA_21
Zeta_toxin
RsgA_GTPase
AAA_30
AAA_15
DEAD
DUF87
DUF815
G-alpha
AAA_25
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
127767925
NCBI-ProteinID:
XP_052149376
LinkDB
All DBs
Position
1:complement(9667401..9674132)
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AA seq
1285 aa
AA seq
DB search
MPESWRDAEANASSSASVAAADSSPGNGKGGGGGGGAAVARGERAASASASARVPFHKLF
AFADKTDAALMALGTLGAVANGAALPFMTVLFGNLIDAFGGAMGIHDVVNRVSMVSLEFI
YLAIASAVASFVQVTCWMITGERQAARIRNLYLKTILRQEIAFFDKYTNTGEVVGRMSGD
TVLIQDAMGEKVGKFIQLVVTFLGGFIVAFAQGWLLTLVMMATIPPLVVAGAVMSNVVAK
MASLGQAAYAESSVVVEQTIGSIRTVASFTGEKQAVEKYNKSLKSAYKSGVREGLAAGLG
MGTVMVLLFCGYSLGIWYGAKLILLKGYTGAKVMNVIFAVLTGSLALGQASPSMKAFAGG
QAAAYKMFETINRKPEIDAYSTTGMKPDDIRGDIEFRDVYFSYPTRPDEQIFRGFSLSIP
SGTTVALVGQSGSGKSTVISLIERFYDPQLGDVLIDGVNLKEFQLRWIRSKIGLVSQEPV
LFAASIKENIAYGKDNATDQEIRAAAELANASKFIDKMPQGLDTSVGEHGTQLSGGQKQR
IAIARAILKDPRILLLDEATSALDAESERIVQEALDRVMTNRTTVIVAHRLSTVRNADTI
AVIHQGTLVEKGPHHELLKDPEGAYSQLIKLQEANRQDKSDRKGDSGARSGKQLSINQSA
SRSRRSSRDNSHHSFSVPFGMPLGIDIQDGSSDNLCDGMPQDVPLSRLASLNKPEIPVLI
LGSIASVISGVIFPIFAILLSNVIKAFYEPPHLLRKDSQFWSSMFLVFGAVYFLSLPVSS
YLFSIAGCRLIKRIRLMTFEKVVNMEIEWFDHPENSSGAIGARLSADAAKVRGLVGDALQ
LVVQNTTTLIAGLVIAFVSNWELSLIILALIPLIGLNGWIQMKFIQGFSADAKMMYEEAS
QVANDAVSSIRTVVSFSAEEKVMDLYKKKCEGPLRTGIRTGIISGIGFGVSFFLLFGVYA
ASFYAGARLVEENKTTFPKVFRVFLALAMAAIGVSQSSTLTSDSSKAKSAVSSIFAIVDR
KSRIDPSEDAGVTVETLHGNIEFQHVSFRYPTRPDVEIFRDLCLTIHSGKTVALVGESGS
GKSTAISLLQRFYDPDVGHILLDGVDIQKFQLKWLRQQMGLVSQEPALFNDTVRANIAYG
KEGEATESEIIEAAKLANAHKFISSSHQGYGTTVGERGAQLSGGQKQRIAIARAIVKDPK
ILLLDEATSALDAESERVVQDALDRVMVNRTTVIVAHRLSTIQNADLIAVVKNGVIIEKG
KHDTLMNIKDGAYASLVALHSAASS
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgccggagtcttggagagacgcggaggcgaacgcgtcgtcgtcggcctccgtcgccgcg
gcggactcgagcccggggaatggcaagggcggtggcggcggcggcggcgccgcggtggcg
aggggagagcgggcggcgtcggcgtcggcgtcggcgcgggtgccgttccacaagctgttc
gcgttcgcggacaagacggacgcggcgctgatggcgctggggacgctgggcgcggtggcg
aacggcgccgcgctgccgttcatgacggtgctcttcggcaacctcatcgacgccttcggc
ggcgcgatgggcatccacgacgtcgtcaaccgggtgtccatggtctccctcgagttcatc
tacctcgccatcgcctccgccgtcgcctccttcgtccaggtgacatgctggatgatcacc
ggagagcggcaggcggcgaggatacggaacctgtacctcaagaccatcctgaggcaggag
atcgccttcttcgacaagtacaccaacaccggcgaggtcgtcggcaggatgtccggcgac
accgtgctcatccaggacgccatgggcgagaaggttggcaagttcattcagctggtggtg
acgttcttgggcggattcatcgtcgccttcgcgcaggggtggctcctcaccctggtcatg
atggcgaccatcccgccgctcgtcgtcgcgggggccgtcatgtccaacgtcgtcgcaaag
atggcgtccctcggccaggcggcgtacgccgagtcgtcggtggtggtggagcagaccatc
ggatccatcagaacagttgcatctttcaccggggagaagcaggcagtggagaagtacaac
aagtccctgaaaagcgcctacaaatcaggcgttcgggagggcctcgcagccgggcttggc
atgggcacggtcatggtgctcctcttctgcggctactcgctggggatatggtatggtgcc
aagctcatcttgctcaagggatataccggcgccaaggtcatgaatgtcatctttgcagtg
ctaacaggatctctagcactagggcaggcatcaccaagcatgaaagcttttgcaggtggg
caggctgctgcatacaaaatgttcgagacaataaacagaaaaccagagatcgatgcatac
agcaccacaggaatgaagcccgatgacattcgaggggatattgagtttagggacgtatat
ttctcctatccaactaggcctgatgagcaaatattcagaggtttctccctttccataccc
agtggcacaacagttgcattggtcggtcagagtgggagtggtaaatcaacggttatcagc
ctaatcgaaaggttttacgaccctcagcttggtgatgttctcatagatggtgtgaatctc
aaggaattccagcttaggtggatcagaagtaaaattggccttgtcagccaagaaccagtc
ctatttgctgctagcataaaggaaaacatagcttatggcaaagacaatgcaacggatcaa
gaaattagagctgcagctgagcttgcgaatgcctctaaattcatagataaaatgcctcag
ggccttgatacttcagttggtgaacatgggactcagctttctggtgggcagaagcaaaga
attgccatagcaagagcaattctaaaagatccaaggatcctactgctagatgaagctaca
agcgctctggatgctgagtctgagaggattgtgcaggaggctcttgacagggtcatgact
aacagaacaactgtcatagttgcacaccgcttgagtacagttagaaatgctgacaccatc
gctgtcattcatcaaggaacattagtggaaaaaggtccacaccatgagcttctgaaggat
cctgaaggagcttacagccaactgataaagctgcaggaagcaaaccggcaggacaagtct
gaccgaaagggtgactctggagctcgttcaggcaaacaattgtcaataaatcagtctgct
agccgcagccggaggtcatcccgtgataacagccaccattcattctctgtaccatttggt
atgcccctagggattgacatccaggatggttcctctgataatctatgtgatgggatgcca
caggatgtgcctctaagtcgtcttgcgtctctgaacaagccagaaattccagtgctcata
ctaggttccattgcatctgtcatcagcggagtaatcttcccaatctttgctatactgctg
tcaaatgtgatcaaagcattctatgaacccccacatctgctgaggaaagattcgcagttc
tggtcatccatgttcttggtgtttggcgcagtatactttttgtcacttccagttagttcg
taccttttctctatagctgggtgcaggttgatcaaaaggataagattgatgacatttgag
aaggtggtaaatatggagatcgaatggtttgatcacccagaaaactcaagtggagcaatt
ggtgcaaggctatcagctgatgcagctaaagttagggggcttgtgggtgatgcacttcaa
ttagttgtacaaaacacaacaaccttgattgctggtttagtcattgcctttgtatcaaac
tgggagttatcactcatcatcttagctttaataccactcattggtctaaatggatggatc
cagatgaaattcattcagggtttcagtgcagatgcaaagatgatgtatgaggaggcaagt
caagtggcaaatgatgcagtaagcagtataagaaccgtagtctccttctcagcagaagaa
aaggttatggatttgtacaagaagaaatgtgaaggccccttaaggacagggattagaaca
gggattataagtggaattggctttggtgtttcatttttcttgctatttggtgtatatgca
gctagcttttatgctggtgctcggcttgttgaggaaaacaagacaacttttcctaaagtt
ttcagggtttttcttgctcttgctatggcagcgattggggtgtcgcaatcaagtaccctt
acatcagattcttccaaagcaaaatcagctgtgtcttcgatatttgcaattgtggatcgt
aaatctaggatagacccaagtgaggatgcaggggtaactgtcgaaacactgcacggcaat
attgagttccagcatgttagcttcagatatccaaccaggccagatgttgagatattccga
gacttgtgcttgacaattcattctgggaagaccgttgcacttgttggggagagtggtagt
ggcaaatcaacagcaatttcattgcttcagaggttttatgatcctgacgtaggacatata
ctgctagatggtgtggacattcagaagtttcagctaaagtggctgaggcaacaaatgggt
ctggtgagtcaagaacctgccctcttcaacgacacagtacgagcaaatattgcttatggg
aaggagggagaagcaacagaatcagaaatcattgaagcagccaaattggcaaatgcccac
aagttcattagttcctcgcatcagggttatggcacaacagttggagagcggggagctcag
ttgtctggaggccaaaagcagcgtatcgcgatcgcgcgtgcgattgtgaaggatcccaag
atccttctgctggatgaagcaaccagtgcgctggatgctgaatccgaaagggtggttcaa
gacgcgctggacagagtgatggtcaaccggacaaccgtgatcgttgctcaccgtttgtct
acaatacaaaatgcggatttgatcgcagtcgtcaagaatggagtgatcatcgagaaggga
aagcacgataccttgatgaacatcaaggatggcgcctacgcctccctcgtcgcccttcat
tcagcagcttcttcatag
DBGET
integrated database retrieval system
