Oryza glaberrima (African rice): 127770164
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Entry
127770164 CDS
T08853
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127770164
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127770164
04147 Exosome [BR:
ogl04147
]
127770164
04090 CD molecules [BR:
ogl04090
]
127770164
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127770164
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127770164
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127770164
CD molecules [BR:
ogl04090
]
Proteins
127770164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
AAA_16
Zeta_toxin
AAA_22
nSTAND1
AAA_30
DUF87
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
127770164
NCBI-ProteinID:
XP_052151794
LinkDB
All DBs
Position
1:complement(39513782..39522315)
Genome browser
AA seq
1397 aa
AA seq
DB search
MVSRGLFGWSPPHVQPLTPVSEASEPPESPSPYAADLAGDAAPPPEDDAAAALDDGDDEP
DPPPAAVPFKRLFACADRLDWALMSAGALAAAAHGVALVVYLHLFGTAIHSLHGRHNHDL
FHHINQHALHFLYIAIGVFFAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYG
NNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFGGLIIGLVNCWQIALLTLATGPFIV
AAGGISNIFLHRLAENIQDAYGEAASVAEQAILYIRTLYSFTNETLAKYSYATSLQATLR
YGILISLVQGLGLGFTYGLAICSCALQLWVGRFLISHGKANGGEVVVALFSIILSGLGLN
QAATNFYSFEQGRIAAYRLYEMISRSTSVVNQDGRTLPSVQGNIEFRNVYFSYLSRPEIP
ILSGFYLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRS
QIGLVTQEPALLSLSIRENIAYGRSATTDQIEEAAKTAHAHTFISSLEKGYDTQVGRAGL
SLTEEQKIKLSIARAVLSNPSILLLDEVTGALDFEAEKAVQEALDILMLGRSTIIIARRL
SLIRNADYIAVMEEGQLVEMGTHDELLNLDGLYAELLRCEEAAKLPKRTPIRNYKEPSSF
QIERDSSASHSFQESSSPNMSKSPSLQKTHGFLAFRNSDANHNSHESPNIQSPPSEQMAE
TRLPTVASERAPSIKRQDSFEMKLPDLPKIDVPLHRQSSNTSDPESPISPLLTSDPKNER
SHSKTFSRPLDMFDNFHAEESKKQQTKAPSFWRLVELSLAEYFYALLGSAGAACFGSFNP
LLAYTISLIVVAYYRIGVRDVHDEVNKYCSFIVGMGIITVLANFLQHFYFGIMGEKMTER
VRRMMFSAILRNEVGWFDEEENSADILSMRLANDATFVRAAFSNRLSIFIQDTAAIFVAL
LLGMLLEWRVALVALATLPILVISAVAQKMWLSGFSRGIQEMHRKASLVLEDAVRNIYTV
VAFCAGNKIMELYRLQLGNILWKSLVHGMGIGFAFGLSQFLLFACNALLLWYTAVAVKNG
HLSLVTALKEYIVFSFATFALVEPFGLAPYILKRRKSLTSVFEIIDRAPKIDPDDASGLK
PPNVYGSIEFRNVDFCYPTRPETMVLSNFSLRVNGGQTVAVVGVSGSGKSTVISLIERFY
DPTAGQVLLDGRDLKLFNLRWLRSHMGLVPQDPVIFSTTIRENIIYARHNATESEMKEAA
RIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSAIESE
SSRVVQEALDTLIMGNKTTILIAHRAAMMKHVDNIVVLNGGKIVEQGTHDSLVQKNGLYV
KLMQPHFTKGFRQRRLI
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgcggggcctcttcggctggtccccgccgcacgtccagcctctcactcccgtc
tccgaggcctccgagccgccggaatcgccctctccctacgccgctgacctcgccggggac
gccgcgccgcctccggaggatgacgccgccgccgccctcgacgatggggacgacgagccc
gatccgccccccgccgccgtccccttcaagcgcctcttcgcctgcgccgaccgcctcgac
tgggcgctcatgtccgccggcgcccttgccgccgccgcccacggggtggccctcgtcgtc
tacctccacctcttcggcaccgccatccactcgcttcatggccgccacaaccacgacctt
ttccaccacatcaaccagcatgctttacacttcctatatattgccattggcgttttcttt
gcgggatggatagaggtttcatgctggattcttactggggaaaggcagacagcagtgata
agatcaaagtatgtacaagtgttgttaaatcaagacatgagtttctttgatacctatggg
aacaatggtgatattgtcagtcaagtgctgagtgatgtcttactcatccagtctgcgctg
agtgagaaagttgggaactacattcacaacatggctaccttttttggtggtcttatcatc
ggtttggtcaactgttggcaaatagctcttttgacattggctactggtccgttcattgtt
gctgcaggaggaatatcaaatatttttctccacaggcttgcagaaaacattcaggatgcg
tatggtgaagcagcaagcgttgccgaacaggcaatcttatacattaggactttgtactca
ttcacaaatgagaccctcgcaaaatattcttatgctacttcacttcaagcaacactgcgc
tatggaatcctgataagtctggtgcaaggtcttggtcttggatttacatatggccttgcc
atatgttcttgtgccttacaactttgggttgggaggttccttatatctcatggaaaagct
aatggtggtgaagttgtagtagccctgttttctattatcctgagtggcctgggacttaat
caagcagcaacaaacttctattcttttgaacaaggacgtatagctgcatacaggctctat
gaaatgattagccgttcaacctctgttgtaaaccaggatggccgtaccttaccttcagtg
caaggcaacattgagttccgcaatgtctacttcagttatctatcccgcccagaaatcccc
attttaagtggcttctaccttactgtacctgctagaaagactgtcgctcttgttggcaga
aatggttcagggaaaagcagcattattcctctcatggaacgtttctatgatccaacttta
ggtgaagtgcttttggatggagagaatataaagaacctgaagttagagtggttaagaagc
cagataggacttgtgacccaggaaccggctttattgagcttgagcatcagggaaaatatt
gcatatggaagatctgccacaactgaccagattgaggaggcagcaaagacagctcatgca
catactttcatcagttcacttgaaaaaggatatgatactcaggttggtcgggctggcctt
tcactgacagaagaacaaaagataaagctctccattgctcgtgctgtgctttcaaatcca
tcaattcttttactggatgaggttactggtgctcttgattttgaggctgagaaagctgtt
caggaagcactagatattctgatgcttggtaggtctaccatcatcatagctagacgcctc
agtcttatcaggaatgctgattatatagctgtaatggaggaaggtcagcttgttgagatg
ggaacacatgatgagttgttaaatctggatggcctttatgcagaactacttaggtgtgaa
gaagcagcaaaacttccaaagcggactccgataagaaactacaaagagcctagctccttc
caaattgaaagggattcttcagcaagtcacagcttccaagagtcatcatctcctaatatg
tcaaagtcgccgtcacttcagaaaacacacggttttcttgcattccgtaattcagatgca
aatcataactcacacgaatcaccaaatattcaaagccctccttccgaacaaatggcagaa
actaggttacctacagttgcttctgagagagctccatccatcaaaaggcaggacagtttt
gaaatgaaattgcccgatcttcccaaaattgatgtcccactacaccgacaatcttcaaat
acttcagatccagaatcaccaatatcaccactattgacttctgatccaaagaatgagcgc
tcgcactcaaaaactttcagtcgtcctcttgatatgtttgacaattttcatgctgaggag
tcaaagaagcagcaaacaaaagctccatcgttttggaggcttgtagaacttagtcttgct
gagtatttttatgctctattagggagtgctggtgctgcttgctttggttcatttaatcct
cttcttgcttatacaatatctttaatagtggtggcatactatagaattggtgtacgtgat
gtgcatgatgaagtcaataagtactgctcattcattgttggcatgggtataataaccgtg
ctagctaacttcttacagcacttctattttggtataatgggagagaagatgactgaacgt
gttagaaggatgatgttttcagcaattttgcgcaatgaagtagggtggtttgatgaagaa
gaaaacagtgcagacatattatcaatgcgactcgcaaatgatgctacttttgttcgtgct
gctttcagcaacaggctttctatattcattcaggatacagcagccatttttgtggcactt
cttcttggcatgttgctagaatggcgtgttgctctggttgccctggcaactttgcccatc
cttgtaatttctgcagttgcgcagaaaatgtggctttctggcttttcaagaggaattcag
gagatgcacaggaaggcttctttggttcttgaggatgcagtcaggaatatctatactgtt
gtggcattttgtgctggtaacaaaataatggaactttacagactgcagcttgggaatatt
ctttggaaaagcttggttcatggaatgggtattggttttgcctttggcttatctcagttc
cttcttttcgcctgcaatgcacttctgctgtggtatacagccgtagctgttaagaatggg
caccttagtctggtaacagcacttaaagagtacattgtcttctcttttgcgacttttgca
ctggtggagccatttggccttgcgccatatattctcaagcgtcgaaaatctctgacgtcg
gtatttgaaattattgatcgtgcacccaagattgatccagatgatgcaagtgggctaaaa
ccccccaatgtctatggtagcattgaattcaggaatgttgatttttgctatcctacacgc
cctgagacgatggttttgagtaatttcagccttagagtcaatggaggacaaactgttgct
gtggtaggtgtatctggatcagggaagagcacggtaatttctttgatagagagattctat
gatccaaccgccgggcaagttttattggatggccgtgatctgaagctgttcaacttgaga
tggttgcggagccacatgggtttagttcctcaagacccagttatattctccacaaccata
agggagaacataatctatgcaaggcacaatgcaacagagtctgagatgaaagaggcggct
aggattgcgaatgctcaccatttcattagcagtttgccacatggctatgacacacatgtg
ggaatgaggggagtggatttaactcctgggcagaagcagcgaatcgccattgcccgtgta
gtgctgaagaatgcacccattttgctgcttgacgaagccagttctgcaattgaatccgag
tccagtagagtggtgcaggaggccctcgacacattgattatggggaataagacgacaatt
ctcattgcacatagggcggcaatgatgaagcatgtggataacattgttgttctgaatggc
ggaaagatagttgagcagggaacgcatgattcactggtgcaaaagaatgggttgtatgtc
aagttgatgcaacctcatttcaccaaaggattccgtcaacgtagactaatataa
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