Oryza glaberrima (African rice): 127770468
Help
Entry
127770468 CDS
T08853
Name
(RefSeq) ABC transporter B family member 19-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127770468
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127770468
04147 Exosome [BR:
ogl04147
]
127770468
04090 CD molecules [BR:
ogl04090
]
127770468
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127770468
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127770468
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127770468
CD molecules [BR:
ogl04090
]
Proteins
127770468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
ABC_ATPase
Zeta_toxin
AAA_16
AAA_21
DUF87
AAA_15
DUF4044
Glyco_transf_22
Motif
Other DBs
NCBI-GeneID:
127770468
NCBI-ProteinID:
XP_052152158
LinkDB
All DBs
Position
4:complement(19986615..19993177)
Genome browser
AA seq
1259 aa
AA seq
DB search
MADESGSCGGGGGGGGGCEAVKKRVDQSVAFHELFGFADPLDWLLMAAGSAGAVVHGAAM
PVFFLLFGELINGFGKNQHSLRRMTDEVSKYSLYFVYLGLVVCASSYLEIACWMYTGERQ
VGALRRRYLEAVLRQDVGFFDTDARTGDVVFSVSTDTLLVQDAIGEKVGNFIHYLSTFLA
GLVVGFVSAWRLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRDSYANAGIIAEQAIAQVR
TVYSYVGESKALNSYSEAIQNTLKLGYKAGMAKGLGIGCTYGIACMSWALVFWYAGVFIR
NGQTDGGKAFTAIFSAIVGGLSLGQSFSNLGAFSKGKIAGYKLLEVIRQRPTIVQDPADG
RCLDEVHGNIEFKEVAFSYPSRPDVMIFRDFSLFFPAGKTAAVVGGSGSGKSTVVALIER
FYDPNQGQVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTILENILYGKPDATMAEVEA
AATSANAHSFIALLPNGYNTQVGERGLQLSGGQKQRIAIARAMLKNPKILLLDEATSALD
AGSENIVQEALDRLMVGRTTVVVAHRLSTIRCVDMIAVIQQGQVVETGTHDELLAKGSSG
AYAALIRFQEMARNRDFRGPSTRKSRSSRLSNSLSTRSLSLRSGSLRNLSYSYSTGADGR
IEMVSNADNDRKYPAPKGYFFKLLKLNAPEWPYTILGAIGSILSGFIGPTFAIVMSNMIE
VFYFRDPNAMERKTREYVFIYIGTGLYAVVAYLVQHYFFSIMGENLTTRVRRMMLAAILR
NDVGWFDQEENNSSLVAARLSTDAADVKSAIAERISVILQNMTSLLVSFVVGFIIEWRVA
VLILVTFPLLVLANFAQQLSMKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQDKVLS
LFCTELRVPQMHSLRRSQISGALFGLSQLSLYASEALILWYGAHLVRHHVSTFSKVIKVF
VVLVITANTVAETVSLAPEIVRGGESIRSVFAILNYRTRIDPDEPETEPVESVRGDIDFR
HVDFAYPSRPDVMVFKDFSLRIRAGQSQALVGASGSGKSTVIALIERFYDPLAGKVMIDG
KDIRRLNVRSLRLKIGLVQQEPVLFATSIFENIAYGKDGATEEEVIEAAKVANMHGFVSA
LPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPAVLLLDEATSALDAESECVLQEALER
IMKGRTAVLVAHRLSTIRGVDSIAVVQDGRVVEQGSHGELVSRPDGAYSRLLQLQLHHG
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgagtcagggagctgcggcggcggcggcggtggcggagggggatgcgaggcg
gtgaagaagagggtggaccagagcgtggcgttccatgagctgttcgggttcgcggacccg
ctcgactggctgctcatggcggccgggagcgccggggcggtggtgcacggcgccgccatg
ccggtgttcttcctcctcttcggcgagctcatcaatggcttcggcaagaaccagcacagc
ctccgccggatgaccgacgaggtgtccaagtactcgctctacttcgtctacctcggcctc
gtggtgtgcgcctcgtcttaccttgagatcgcttgctggatgtacaccggggagcgccag
gtgggcgcgctgcggcggcgatacctggaggccgtgctgcggcaggacgtggggttcttc
gacaccgacgcgcgcaccggcgacgtcgtcttcagcgtctccacggacacgctccttgtc
caggacgccatcggcgagaaggtcggcaacttcatccactacctatcgacgttcctggcg
ggtctcgtcgtcgggttcgtctccgcctggcggctcgcgctgctcagcatcgccgtcatc
ccgggcatcgccttcgccggcgggctgtacgcctacacgctcaccggcctcacgtccaag
agccgggactcctacgccaacgccggaatcatagccgagcaggcgattgcccaagtcagg
acagtgtattcctatgtgggggagtccaaggccctcaactcgtactcggaggcgattcag
aacacattgaagctggggtacaaagcagggatggccaagggtcttggcattggctgcact
tacggtatcgcctgcatgtcctgggcgctggtgttctggtacgcaggagtgttcatccgg
aatggccagaccgatggtggaaaggcattcaccgcgattttctctgcaattgtcggcggc
ctgagtttgggacaatcgttctcgaatctaggcgctttcagtaaaggaaagattgccgga
tacaagctgttggaggtgataaggcagaggccgacaattgttcaggacccagcagatgga
aggtgcctggatgaagtccatggcaacatagaatttaaggaagtggcctttagttatccg
tcccgtccggatgtcatgatattccgtgacttttccctcttctttcctgccggtaaaact
gcagctgttgttggaggtagtgggtctggaaagagtacagttgtggctctgattgaaaga
ttttacgatcctaatcagggtcaagttttgctggacaatgtggacatcaagacactacaa
ttgaagtggctgagagatcagattggtttggtgaatcaagaacctgcactctttgctacc
accattcttgaaaatattctttacggcaagcctgatgccacaatggctgaggttgaggct
gcggctacatctgccaatgcccatagcttcattgctcttcttcctaatggctataacact
caggtcggggagagaggacttcaactctctggcggtcagaagcaacgtattgccattgct
cgtgcaatgctaaagaacccgaagatccttctcttagatgaggcgactagtgcacttgat
gctggttcggagaatattgttcaagaagcccttgaccgcctgatggtcggtaggacaact
gtcgtggttgcgcataggctgtcaactatacggtgcgttgacatgattgctgtgatccag
caagggcaggttgttgagaccggtacccatgacgagctccttgcgaaaggaagctcagga
gcttatgctgctctcattagattccaggagatggccagaaaccgtgacttccgtggccca
tccacccgcaagtcccggtcatcccgcttgagcaattcgctgtccactcggtcattgagc
cttaggtcggggagcttgaggaacttgagctactcatacagcactggtgcagatggccgt
attgaaatggtttccaatgccgacaatgaccggaagtacccagcacctaagggttatttt
ttcaaactccttaagctaaatgcacccgagtggccctataccatactgggagccatcggg
tccatcctatctggcttcatcggccctacatttgctattgtgatgagcaacatgattgaa
gtgttctatttccgggacccgaatgcaatggagaggaagactagggagtatgtgtttatc
tacattggaactgggttatatgcggttgtcgcgtacctcgttcaacattacttcttcagc
atcatgggcgaaaatctgaccaccagggtgcggaggatgatgcttgctgctatcttgagg
aatgatgtggggtggtttgatcaagaggagaacaattcaagcctcgtggcggcacgcctt
tccacagacgcagccgatgtgaagtcggccatagcagaacggatatcagtcatcctgcag
aacatgacctcacttctcgtgtccttcgttgtgggcttcatcatcgaatggcgggtggcc
gtcctcattcttgtcaccttccctctccttgtccttgccaactttgcccagcaactgtcc
atgaagggcttcgccggcgacacggccaaggcgcacgccaagacgagcatgatcgccggg
gagggcgtcagcaacatccgcaccgtggctgcgttcaacgcgcaggacaaggtcctgtcc
ctcttctgcaccgagctgcgcgtcccgcagatgcacagcctccgccggagccagatctcc
ggcgcgctcttcggcctgtcgcagctgtcgctgtacgcctccgaggcgctcatcctctgg
tacggcgcgcacctcgtccgacaccacgtgtccaccttctccaaggtcatcaaggtcttc
gtcgtgctcgtcatcacggcgaacaccgtcgccgagaccgtcagcctcgctccggagatc
gtgcgtggcggcgagtccatccggtccgtctttgccatcctcaactacaggacgcgcatt
gacccggatgagccggaaaccgagcccgtcgagtccgtccgtggcgacatcgacttccgg
cacgtcgacttcgcctacccgtcgcgccctgacgtcatggtcttcaaggatttcagcctc
aggatccgagctgggcagagtcaggcgctcgtcggagcgagcgggtcagggaagagcacc
gtcatcgctctcatcgagcgtttctacgaccctctcgccgggaaggtcatgatcgacggc
aaggacatccggcggctgaacgtgaggtcgctgcgtctcaagatcggcctggtgcagcag
gagcccgtgctgttcgccaccagcatctttgagaacatcgcctacggcaaggacggcgcg
acggaggaggaggtgatcgaggccgccaaggtggccaacatgcacggcttcgtcagcgcg
ctcccggagggctacaagacccccgtcggcgagcgcggggtgcagctctcgggcgggcag
aagcagcggatcgccatcgcgcgcgccgtgctcaaggaccccgccgtgctcctcctcgac
gaggcgacgagcgcgctggacgcggagtccgagtgcgtgctgcaggaggcgctcgagcgg
atcatgaagggccggaccgcggtgctggtggcgcaccggctgtcgaccatccgcggcgtc
gactcgatcgccgtggtgcaggacgggcgcgtcgtcgagcagggcagccacggcgagctc
gtgtcgcggcccgacggcgcctactcgcggctgctgcagctgcagctacaccacggctga
DBGET
integrated database retrieval system
