Oryza glaberrima (African rice): 127770531
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Entry
127770531 CDS
T08853
Name
(RefSeq) ABC transporter B family member 19-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127770531
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127770531
04147 Exosome [BR:
ogl04147
]
127770531
04090 CD molecules [BR:
ogl04090
]
127770531
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127770531
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127770531
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127770531
CD molecules [BR:
ogl04090
]
Proteins
127770531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
Zeta_toxin
ABC_ATPase
AAA_22
AAA_21
DUF87
AAA_15
AAA_30
AAA_19
Glyco_transf_22
DUF4044
Motif
Other DBs
NCBI-GeneID:
127770531
NCBI-ProteinID:
XP_052152243
LinkDB
All DBs
Position
4:complement(28906196..28912617)
Genome browser
AA seq
1271 aa
AA seq
DB search
MAESAAAAAAAAGDGKVEKAANGGVNGCDAAGEGKKRADQAVAFHELFTFADKWDLVLMA
AGSLGALAHGAAMPLFFLLFGDLINGFGKNQTDLRTMTDEVSKYALYFVYLGLVVCASSY
AEIACWMYTGERQVIALRKAYLDAVLRQDVGFFDTDARTGDIVFGVSTDTLLVQDAIGEK
VGNFIHYIATFLAGLVVGFVAAWRLALLSVAVIPAIAFAGGLYAYTLTGLTSKSRESYAN
AGVVAEQAIAQVRTVYSFVGESKALNSYSEAIQNTLKLGYKAGMAKGLGIGCTYGIACMS
WALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQAFSNLGAFSKGKIAGYKLLEVI
RQKPSIVHDHKDGKLLAEVHGNIEFKDVTFSYPSRPDVMIFRDFSLFFPAAKTVAVVGGS
GSGKSTVVALIERFYDPNEGQVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTIHENIL
YGKPDATMAEVEAAATASNAHSFISTLPNGYNTMVGERGIQLSGGQKQRIAIVRAMLKNP
KILLLDEATSALDAGSENIVQEALDRLMTGRTTVVVAHRLSTIRNVNMIAVIQQGQVVET
GTHDELLAKGSSGAYASLIRFQEMAQNRDLGGASTRRSRSMHLTSSLSTKSLSLRSGSLR
NLSYQYSTGADGRIEMISNADNDRKYPAPRGYFFKLLKLNAPEWPYAVLGAVGSVLSGFI
GPTFAIVMGEMLDVFYYRDPNEMEKKTKLYVFIYIGTGLYAVVAYLVQHYFFSIMGENLT
TRVRRMMLSAILRNEVGWFDEEENNSSLVAARLAVDAADVKSAIAERISVILQNMTSLMT
SFIVGFIIEWRVALLILATFPLLVLANFAQQLSMKGFAGDTAKAHAKSSMVAGEGVSNIR
TVAAFNAQNKILSLFSYELRIPEQQILRRSQTSGLLFGLSQLCLYSSEALILWYGSHLVR
SHGSTFSKVIKVFVVLVVTANSVAETVSLAPEIVRGGESIRSIFGILNRATRIEPDDPES
ERVTNVRGDIELRHVDFAYPARPDIQIFKDFNLKIQAGRSQALVGASGSGKSTVIALIER
FYDPTGGKVTIDGKDIRRLNLKALRLKIGLVQQEPVLFAASILENIAYGKDGATEEEVIQ
AAKTANVHGFVSQLPNGYKTAVGERGVQLSGGQKQRIAIARAVLKDPAILLLDEATSALD
AESECVLQEALERLMKGRTTVLVAHRLSTIRGVDRIAVVQDGRIVEHGSHSDLVSRPEGA
YSRLLQLQHHA
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcggcggcggcggcggcggcggcggcgggggacgggaaggtggagaaggcg
gcgaacggcggcgtgaacgggtgcgatgcggcgggggaggggaagaagagggcggaccag
gcggtggcgttccacgagctgttcacgttcgccgacaagtgggacctggtgctcatggcg
gcggggagccttggcgcgctcgcccacggcgccgccatgccgctcttcttcctcctgttc
ggtgacctcatcaacggcttcggcaagaaccagaccgacctccgcaccatgaccgacgag
gtctccaagtatgccctctacttcgtctacctcggactggtggtgtgcgcctcctcatac
gcagagatcgcgtgctggatgtacaccggggagcggcaggtgatcgcgctgaggaaggcg
tacttggacgccgtgctgcgccaggacgtggggttcttcgacacggacgcgcgcacgggg
gacatcgtgttcggggtctccaccgacacgctgctcgtgcaggacgccatcggcgagaag
gtcggcaacttcatccactacatcgccaccttcctcgccgggctggtggtcgggttcgtc
gcggcgtggcggctcgcgctgctcagcgtggccgtcatcccggccatcgccttcgccggc
ggcctgtacgcctacacgctcaccgggcttacctccaagagccgggagtcctatgccaat
gccggcgtcgtggcagagcaggcaattgctcaagttagaacagtttactcatttgttgga
gagagcaaagcactcaattcctactctgaagcaattcagaataccctgaagcttgggtac
aaagctgggatggcaaaaggtttgggtattgggtgtacatatggtatagcatgcatgtca
tgggcattggtattctggtacgctggtgtcttcatcaggaatgggcagactgacggtggc
aaagcctttacagctatcttctctgctattgttggtggcatgagtcttggccaggcattc
tcaaatcttggagccttcagcaaagggaagattgctggttacaaactgttggaggtcatt
cgccagaaaccctctatagttcatgatcataaggatgggaagttgctggcagaggtccat
ggaaacatagaattcaaagatgttacttttagttatccgtcaaggcctgatgtcatgatc
tttcgggatttctcccttttcttccctgctgcgaaaactgttgcggttgttggaggaagt
gggtcaggcaagagtactgttgtggctttgatagaaaggttttatgatcctaatgaaggc
caggttttgcttgacaatgttgatattaagacacttcagttgaggtggctgagagatcag
attggtcttgtaaaccaagaacctgctctttttgcaacaactatacatgagaacatattg
tatggaaagcctgatgctacaatggctgaagtcgaggctgcagcaactgcatccaatgct
catagttttatatctactcttccgaatggctacaacacgatggtaggggaacgaggaata
cagctgtctggtggtcagaaacagcgtattgcaatagttcgtgctatgctgaagaaccct
aagatactgctccttgatgaagctacaagtgctctagatgcaggctcagaaaacattgtc
caagaagctctagaccggctgatgactggaagaacaacggtagttgttgcccaccgtctc
tccactataagaaatgttaacatgatcgcagtcatccagcagggccaagttgttgagact
ggcacacatgatgaacttctagcaaaagggagctctggagcgtatgcctccctgattcgt
tttcaagaaatggcacaaaacagagaccttggtggtgcatctacccgcaggtcacgctcg
atgcacctgaccagttcactttccacaaaatctctcagcctcaggtctggaagtttaagg
aacctgagctatcagtacagtactggggcagatggccgcattgagatgatttcaaatgca
gataatgaccgtaaatacccagcaccacgaggttacttcttcaagctcctgaaattgaat
gctcctgaatggccttatgcagtgttgggcgctgttggttctgtcctctctggattcatt
ggtccaacattcgccattgttatgggagaaatgcttgatgtgttctactacagggacccc
aatgaaatggaaaagaaaacaaaattgtatgtgttcatctatattggcactggcctatat
gctgttgtagcttatctcgtgcagcattacttcttcagcatcatgggagaaaatcttaca
accagggttaggaggatgatgctttccgcaatacttaggaatgaagttggttggttcgat
gaagaagagaacaactcaagtcttgtggctgctcgtctagcagttgatgcagctgatgtg
aagtctgcaatagctgagaggatatcagtgattctgcagaacatgacctcccttatgaca
tcgttcatcgttggttttattatcgagtggagagtagcactgcttatcctggccaccttc
cctcttcttgtgcttgctaactttgcccagcaactttcgatgaagggcttcgctggtgac
acagcaaaggcgcatgccaagagcagcatggttgccggtgaaggagtgagcaacatccgc
acagtggcagcattcaatgctcagaacaagatcctttctctgttcagttatgaattgcgc
atacctgaacagcagatcctccgccgcagccagacatcaggccttctgtttggcctctca
cagctctgcctgtactcatcagaagcactcattctgtggtatggttctcatctggtccgg
tctcatggatccaccttctccaaggtcatcaaggtctttgttgtccttgttgtgactgcc
aactccgttgccgagacagtcagccttgccccagagatcgtccgtggaggtgaatccatc
cgctccatctttggcatcctcaacagggcgacaagaatcgagcctgatgatccagagtca
gagcgtgtcaccaatgtccgtggggacattgagcttcggcatgtcgacttcgcctacccg
gctcgccctgacatccaaatcttcaaggacttcaacctaaaaatccaagctgggcgcagt
caagctctggtgggagccagtgggtctggtaagagcactgtgattgctctcattgagcgg
ttctatgatccgaccgggggcaaggtcaccattgacggcaaggacatcaggaggctgaac
ttgaaggccttgcggctgaagataggcctagtgcagcaggagcctgttcttttcgcagcc
agcattcttgagaacattgcctatggcaaggacggtgcaacggaggaggaggtgatccag
gcggcaaaaacagcaaatgtgcacggcttcgtcagtcagctacccaacggctacaagacg
gcggtcggcgagcgaggcgtgcagttgtccggtggccagaagcagcggatcgccattgcc
agggcggtgctcaaggacccggccatcctgctgctggacgaggcgacgagcgcgctggac
gccgagtcggagtgcgtgctgcaggaggcgctggagcggctgatgaaggggcggaccacc
gtgctggtggcgcaccgcctgtcgacgatccgaggcgtggaccgcatcgccgtcgtgcag
gatggccggatcgtcgagcacggcagccactctgatctcgtgtccaggccggagggggcg
tactcgcggttgctgcagctgcaacaccatgcctga
DBGET
integrated database retrieval system
