Oryza glaberrima (African rice): 127778548
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Entry
127778548 CDS
T08853
Name
(RefSeq) beta-hexosaminidase 2
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00511
Other glycan degradation
ogl00513
Various types of N-glycan biosynthesis
ogl00520
Amino sugar and nucleotide sugar metabolism
ogl00531
Glycosaminoglycan degradation
ogl00600
Sphingolipid metabolism
ogl00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ogl00604
Glycosphingolipid biosynthesis - ganglio series
ogl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
127778548
09103 Lipid metabolism
00600 Sphingolipid metabolism
127778548
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
127778548
00531 Glycosaminoglycan degradation
127778548
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
127778548
00604 Glycosphingolipid biosynthesis - ganglio series
127778548
00511 Other glycan degradation
127778548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ogl03110
]
127778548
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
127778548
Chaperones and folding catalysts [BR:
ogl03110
]
Intramolecular chaperones
Others
127778548
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
127778548
NCBI-ProteinID:
XP_052161128
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Position
7:complement(20788447..20791475)
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AA seq
611 aa
AA seq
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MSTNQGVQLRLAAQAKAAMATKNGGFVALLLLLSFLLSSPLPARCDAPLPVNVWPKPTSM
SWAEPHMAVRVSSSFHVVAPSGNAHLLSAARRYAALLLAERYRPLVTPAVNVTAGGAGAG
AAGRGAELGYLTLAVSDLHAPLQHGVDESYALEILPAGAAATVTAATAWGAMRGLETFSQ
LAWWCGRERAVLVAAGVRVEDRPLYPHRGLMLDTGRTYFPVADILRTIDAMAANKMNVFH
WHITDSQSFPLELPSEPALAEKGSYGDGMRYTVDDVKLIVDFAMNRGVRVVPEIDTPGHT
ASWAGAYPELVSCAGEFWLPDASDWPSRLAAEPGAGQLNPLEPKTYQVMSNVINDVTSLF
PDGFYHAGGDEVTPGCWNADPSIQRYLARGGTLSRLLEKFVGAAHPLIVSRNRTAVYWED
VLLDQAVNVTASAIPPETTILQTWNNGGNNTRLIVRAGYRAIVSSASFYYLDCGHGDFAG
NDSAYDDPRSDYGTSGGSWCGPYKTWQRVYDYDVAGGLTAEEARLVVGGEVAMWTEQVDA
AVLDGRVWPRASAMAEALWSGNRDATGRKRYAEATDRLTDWRHRTVGRGVRAEPIQPLWC
RNRPGMCNLVR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaatcagggggtgcagctccgattagcggctcaagctaaggcagccatggca
accaagaacggtggttttgttgcgttgctgctgctgctgtcgttcttgctgagctcgccg
ctgccggcgcgatgcgacgcgccgctccccgtcaatgtctggcccaagccgacgtccatg
tcgtgggcggagccccacatggccgtgcgtgtctcgagctcgttccacgtcgtcgccccg
tccgggaacgcgcacctcctctcggcggcgcggcgctacgccgcgctgctcctcgccgag
cggtaccggcccctcgtgacgccggcggtgaacgtcaccgcgggcggcgccggcgccggc
gcggcgggaaggggagccgagctggggtaccttacgctcgccgtgtccgacctgcacgcg
ccgctgcagcacggcgtggacgagtcgtacgcgctggagatcctccccgccggcgcggcg
gccacggtgaccgcggccacggcgtggggcgccatgcgcggcctcgagacgttctcgcag
ctggcgtggtggtgcgggcgggagcgggcggtgctggtggccgccggcgtgcgcgtcgag
gaccggccgctgtacccgcaccgcgggctgatgctggacaccgggaggacgtacttcccc
gtcgccgacatcctccggacgatcgacgccatggcggcgaacaagatgaacgtgttccac
tggcacatcacggactcccagtcgttccccctcgagctcccctccgagccggcgctcgcc
gagaagggctcctacggcgacggcatgcgctacaccgtcgacgacgttaagctcattgtc
gacttcgccatgaaccgcggcgtccgcgtcgtgccagagatagacacacccggccacacg
gcgtcgtgggccggagcttaccccgagctggtgtcctgcgccggcgagttctggctgccc
gacgcgtctgactggcccagccgacttgccgccgagccgggcgccggccagctcaacccg
ctggagcccaagacgtaccaggtgatgtccaacgtcatcaacgacgtcacctccctcttc
ccggacggcttctaccacgccggcggcgacgaggtcacgccggggtgctggaacgccgac
ccgtccatccagcgctacctcgcccgcggcggcacgctcagccgcctcctcgagaagttc
gtcggcgcggcgcacccgctgatcgtgtcccggaaccggacggcggtgtactgggaggac
gtgctgctggaccaggcggtgaacgtgaccgcgtcggcgatcccgccggagacgacgatc
ctgcagacgtggaacaacggcggcaacaacacgaggctgatcgtgcgcgccgggtaccgg
gccatcgtctcgtcggcgtcgttctactacctcgactgcggccacggcgacttcgccggc
aacgactccgcctacgacgacccgaggagcgactacggcaccagcggcgggtcgtggtgc
gggccgtacaagacgtggcagcgggtgtacgactacgacgtcgcgggcgggctcaccgcc
gaggaggccaggctggtggtcggcggggaggtggcgatgtggacggagcaggtggacgcg
gcggtgctcgacggcagggtgtggccgagggcgtcggcgatggcggaggcgctgtggtcg
ggcaaccgcgacgccaccggccggaagcgctacgccgaggcgaccgaccggctcaccgac
tggcggcaccggacggtggggcgaggggtccgcgcggagcccatccagccgctctggtgc
aggaaccgcccgggaatgtgtaacttggtccggtga
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