Oryza glaberrima (African rice): 127780345
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Entry
127780345 CDS
T08853
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127780345
Membrane trafficking [BR:
ogl04131
]
Autophagy
Other autophagy associated proteins
Others
127780345
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
BCAS3_WD40
RMC1_N
ANAPC4_WD40
CIMR
PD40
Motif
Other DBs
NCBI-GeneID:
127780345
NCBI-ProteinID:
XP_052163202
LinkDB
All DBs
Position
7:25303169..25304951
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AA seq
354 aa
AA seq
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MASQNPGDGGDEQSPPPAPPFPARPTYLSFSHDASCLIAADEASVQWRCCETFKLRGLYE
ESGTTAAAGDMRDRNQSTCAVVRRAGAGFEVRRFRPGSLNYSSRYDSVRIGGGDDDDDVR
SVHVHGDRTVVVHAGRVDVFGLDDERRKAAVLQRRVETGDNRAGACAVSRGPPGSPFAFA
CPGVNDGNLRVERVKGTIVRVFRVADGELLQEMKRGLDRADIYSIVFSPDSEWLAVSSDK
GTVHVFHINVCSPSSSKTGCQDTTQSYESYGAKAMKKYVSSIKDLLTLGYFDPERSVAQF
HLRDNVKYLVAFGTRPNKNIVLIIGMDGSFYRCQFDPVNGGEMKQLEYTNFLNM
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccaaaacccaggcgacggcggcgacgagcaatcgccaccgccggctcctccg
tttccggcgcgccccacctacctatccttcagccacgacgcttcttgcttgatcgccgcc
gacgaagcctccgtccaatggcgctgctgcgagaccttcaagctgcgcgggctctacgag
gagagcgggaccaccgccgccgccggtgacatgcgcgaccggaatcagtcgacgtgcgcc
gtcgtccgccgcgccggcgcggggtttgaggtcaggcgtttcaggccgggctccctcaac
tacagctcgcgctacgacagcgtgcggatcggcggcggcgacgacgacgacgacgtgcgg
tcggtgcacgtccacggcgaccggaccgtcgtcgtgcacgccggccgcgtggacgtgttc
ggcctcgacgacgagaggaggaaggcggcggtgctgcagcggcgggtggaaaccggggac
aaccgggccggcgcctgcgccgtgtcgagggggccgcccggctcgccgttcgcgttcgcg
tgccccggcgtgaacgacggcaacctgcgcgtcgagcgtgtcaagggcaccattgtgcgt
gtgtttcgcgtcgccgacggcgaattgctccaggagatgaaaagaggcttggatagagct
gatatctacagtattgtcttctcccccgattcagagtggcttgctgtctcgagtgataaa
ggaaccgtacatgtttttcatatcaatgtttgttcgccatcttcctccaaaactggttgc
caagatacaactcaatcatatgaatcatatggcgcaaaagcaatgaaaaaatatgtttct
tctataaaagatttacttacattaggatatttcgatccagaaaggtcggtagctcaattc
catctacgtgataatgtaaaataccttgtcgcatttggtacaagaccaaataaaaatatt
gttcttataatcggtatggatggaagtttttaccggtgtcagtttgatccagtaaacggt
ggagaaatgaaacagcttgagtacacgaattttttaaatatgtag
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