Oryza glaberrima (African rice): 127781701
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Entry
127781701 CDS
T08853
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127781701
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127781701
04147 Exosome [BR:
ogl04147
]
127781701
04090 CD molecules [BR:
ogl04090
]
127781701
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127781701
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127781701
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127781701
CD molecules [BR:
ogl04090
]
Proteins
127781701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_16
AAA_22
ABC_ATPase
AAA_29
DUF87
RsgA_GTPase
APS_kinase
AAA_30
nSTAND1
AAA_15
DUF6264
DUF1983
Motif
Other DBs
NCBI-GeneID:
127781701
NCBI-ProteinID:
XP_052164672
LinkDB
All DBs
Position
8:25136710..25142378
Genome browser
AA seq
1343 aa
AA seq
DB search
MEEEIKGRVVVLGADAAADPELEAFHLPSADQPPHSHLLHHHHSPQSHPQPDAPAAAAPP
PPAPLTPPPKSPPPPPHIQTTDLPPPKPLPPAPLRQLFSFADGLDYVLMTLGTLGALVHG
CSLPVFLRFFADLVDSFGSHAAHPDTMLRLVVKYAFYFLVVGAAIWASSWAEISCWMWTG
ERQSTRMRIRYLHAALHQDVSFFDTDVRTSDVIHAINADAVVVQDAISEKLGNLIHYLAT
FVSGFVVGFTAAWQLALVTLAVVPLIAVIGGLSAAALAKLSSRSQDALSDASGIAEQALA
QIRIVQSFVGEERVMRAYSAALAVAQRIGYRSGFAKGIGLGGTYFTVFCCYALLLWYGGH
LVRRAHTNGGLAIATMFSVMIGGLALGQSAPSMAAFAKARVAAAKIFRMMEHKPSMEREG
GVELEAVTGRVELRDVEFSYPSRPDVGILRGLSLSVPAGKTIALVGSSGSGKSTVVSLIE
RFYEPNAGTILLDGHDLRDLNLRWLRRQIGLVSQEPALFATTIRENLLLGRDGATQEELE
EAARVANAHSFIVKLPDAYNTQVGERGLQLSGGQKQRIAIARAMLRNPAILLLDEATSAL
DSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQGGAISEVGTHDELMARGDG
TYARLIRMQEQAHEAALVAARRSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDADFI
TGLGLGVDSKQQQQQHYFRVQASSFWRLAKMNSPEWGYALVASLGSMVCGSFSAIFAYVL
SAVLSVYYAPDAAYMDRQIAKYCYLLIGMSSAALLFNTVQHLFWDTVGENLTKRVRERML
AAVLRNEIAWFDMEDNSSARIAARLALDAQNVRSAIGDRISIIVQNSALMLVACTAGFVL
QWRLALVLLAVFPLVVAATVLQKMFLKGFSGDLERAHARATQIAGEAVANVRTVAAFGSE
AKIAGLFEANLAGPLRRCFWKGQIAGSGYGVAQFLLYASYALGLWYAAWLVKHGVSDFSK
TIRVFMVLMVSANGAAETLTLAPDFVKGGRAMQAVFEAMDRRTEIEPDDVDAAAVPERPR
GEVELKHVDFAYPSRPEVQVFRDLSLRARAGRTLALVGASGCGKSSVLALVQRFYEPNSG
RVLLDGRDLRKFNLRSLRRAMALVPQEPFLFAATIHDNIAYGREGATEAEVVEAATAANA
HKFISALPEGYGTLVGERGVQLSGGQRQRIAIARALVKQAPILLLDEATSALDAESERSV
QEALASSSGSGRTTIVVAHRLATVRNAHTIAVIDDGKVAEQGSHSHLLNHHPDGCYARML
QLQRLSHSHVAPGPSSSTTTHGT
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagataaagggccgcgtcgtcgtcctcggcgccgatgccgccgccgacccg
gagctcgaggccttccatcttccctccgccgaccagcccccgcactcgcacctcctccac
caccaccattctccacaatcccatcctcaacctgatgcaccagcagcagcagcgccaccg
ccacctgctccccttactcctcctcctaagtcgccgccgccgcctccccacatccaaacc
accgaccttccaccgcccaagcccctcccgccggccccgctccgtcaactcttcagcttc
gccgacggcctcgactacgtcctcatgaccctgggcacgctgggcgccctcgtccacggc
tgctccctcccggtcttcctccgcttcttcgccgacctcgtcgactccttcggctcccac
gccgcccacccggacaccatgctccgcctcgtcgtcaagtacgccttctacttcctcgtc
gtcggcgccgccatctgggcctcctcctgggccgagatctcctgctggatgtggaccggc
gagcggcagtccacccggatgcgcatccgctacctccacgccgccctccaccaggacgtc
tccttcttcgacaccgacgtccgcacctccgacgtcatccacgccatcaacgccgacgct
gtcgtcgtccaggacgccatcagcgagaagctcggtaacctcatccactacctcgccacc
ttcgtctccggcttcgtcgtcggattcaccgccgcctggcagctcgccctcgtcaccctc
gccgtcgtcccgctcatcgccgtcatcggcggcctcagcgccgccgcgctcgccaagctc
tcctccaggagccaggacgcgctgtccgacgccagcggcatcgcggagcaggcgctggcg
cagatacgcatcgtgcagtcgttcgtgggcgaggagcgggtgatgcgggcctactcggcg
gcgctggccgtggcgcagcggatcggctaccgctccggcttcgccaagggcatcggactg
ggcggcacctacttcaccgtcttctgctgctacgcgctgctcctctggtacgggggtcac
ctcgtccgacgcgcccacaccaacggaggcctcgccatcgccaccatgttctcagtaatg
ataggcggcctggctcttgggcagtcggctccgagcatggcggcgttcgccaaggcgcgg
gtggcggcggcgaagatattccggatgatggagcacaagccgagcatggagcgggagggc
ggggtggagctggaggcggtgacggggcgggtggagctgcgggatgtggagttctcgtac
ccgtcgcggccagacgtggggatcctgcgggggttgtcgctgagcgtgccggcggggaag
acgatcgcgctggtggggagctccgggtcagggaagagcacggtggtgtcgctgatcgag
aggttctacgagcccaacgccgggaccatcctgctggacggccacgacctgagggacctc
aacctgcggtggctgcgccgccagattggtctggtgagccaggagccggcgctgttcgcc
accaccatccgggagaacctgctgctcgggagggacggcgccacgcaggaggagttggag
gaggccgccagggtcgccaacgcccactccttcatcgtcaagctccccgacgcctacaac
acgcaggttggggagcgcgggctgcagttgtcgggcgggcagaagcagcggatcgccatc
gcgcgcgccatgctccggaacccggccatcctgctgctggacgaggccaccagcgcgctg
gactcggagtcggagaagctggtgcaggaggcgctggaccgcttcatgatcgggcgcacc
acgctggtgatcgcgcaccgcctctccaccatccgcaaggccgacctcgtggccgtcctc
cagggcggggccatctccgaggtgggcacgcacgacgagctcatggcccgcggggatggc
acctacgccaggctcatccgaatgcaggagcaggcgcacgaggccgcgctcgtcgccgct
cgccggagcagcgcgcgaccatccagcgcccgcaactccgtcagctcgcccatcatcacg
cgtaactcctcctacggccgttccccctactcccgccgcctctccgacgccgacttcatc
accggcctcggcctcggagtcgacagcaagcagcagcagcagcagcactacttccgcgtg
caggccagctccttctggcggctggccaagatgaactcgcccgagtgggggtacgcgctc
gtcgcgtcgctgggctccatggtgtgcggctccttcagcgccatcttcgcctacgtcctc
agcgccgtgctcagcgtgtactacgcccccgacgccgcctacatggaccgccagatcgcc
aagtactgctacctcctcatcggcatgtcctccgccgccctgctcttcaacaccgtccag
cacctcttctgggacaccgtcggcgagaacctcaccaagcgcgtccgcgagaggatgctc
gccgccgtgctccgcaacgagatcgcctggttcgacatggaggacaactccagcgcccgc
atcgccgccaggctggcgctggacgcccagaacgtgcgctccgccatcggcgaccgcatc
tccatcatcgtgcagaactcggcgctcatgctggtggcctgcaccgccggcttcgtcctg
cagtggcgcctcgcgctggtgctgctggccgtcttcccgctggtggtggccgccaccgtg
ctgcagaagatgttcctcaaggggttctcgggcgacctggagcgggcgcacgcgagggcg
acgcagatcgcgggagaggcggtggcgaacgtgcgcaccgtggcggcgttcgggtcggag
gcgaagatcgcggggctgttcgaggcgaacctggcggggccgctccggcggtgcttctgg
aaggggcagatcgccgggagcgggtacggggtggcgcagttcctgctgtacgcgtcgtac
gcgctggggctgtggtacgcggcgtggctggtgaagcacggcgtgtcggacttctccaag
accatccgggtgttcatggtgctgatggtgtcggccaacggcgccgcggagacgctgacg
ctggcgccggacttcgtgaagggcgggcgggcgatgcaggcggtgttcgaggcgatggac
cggaggacagagatcgagccggacgacgtggacgcggcggcggtgccggagcggccccgg
ggggaggttgagctgaagcacgtggacttcgcgtacccgtcgcggccggaggtgcaggtg
ttccgggacctgagcctgagggcgcgggcggggcggacgctggcgctggtgggggcgagc
gggtgcggcaagagctcggtgctggcgctggtgcagcgcttctacgagcccaactccggg
cgggtgctcctggacggccgggacctgcgcaagttcaacctgcggtccctgcgtcgcgcc
atggcgctggtgccgcaggagcccttccttttcgcggccaccatccacgacaacatcgcg
tacgggcgcgagggggcgacggaggcggaggtggtggaggcggcgacggcggccaacgcg
cacaagttcatatcggcgctgccggaggggtacgggacgttggtcggggagcgcggggtg
cagctgtcgggcgggcagcgccagcggatcgccatcgcgcgggcactggtgaagcaggcg
cccatcctgctgctggacgaggccaccagcgcgctggacgccgagtcggagcggagcgtg
caggaggcgctcgcctcctcctctggctccggccgcaccaccatcgtggtggcccaccgt
ctggccaccgtccgcaacgcccacaccatcgccgtcatcgacgacggcaaggtggcggag
cagggctcgcactcccacctgctcaaccaccaccccgatggctgctacgcgcgcatgctg
cagctccagcgcctctcccactcccacgttgcgccgggcccctcctcctcaacaacaaca
cacggcacctag
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