Oryza glaberrima (African rice): 127782022
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Entry
127782022 CDS
T08853
Name
(RefSeq) ABC transporter B family member 19-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127782022
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127782022
04147 Exosome [BR:
ogl04147
]
127782022
04090 CD molecules [BR:
ogl04090
]
127782022
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127782022
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127782022
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127782022
CD molecules [BR:
ogl04090
]
Proteins
127782022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
ABC_ATPase
Zeta_toxin
AAA_16
AAA_29
RsgA_GTPase
AAA
AAA_25
AAA_21
AAA_5
Rad17
AAA_33
Cytidylate_kin
Motif
Other DBs
NCBI-GeneID:
127782022
NCBI-ProteinID:
XP_052165056
LinkDB
All DBs
Position
8:2476121..2485958
Genome browser
AA seq
1283 aa
AA seq
DB search
MEGSPSKLKKVLNQVCADLESGEDNDKGKNIFGPNAAAAALLQTIRRLTKTMALIQEKDH
PVEPSKHISVDDEEITSPPVEEKAAAAADKKFPFFGLLRYADGLDWLLMVAGTMGSFLHG
MGPSMSYYLVGKGIDVVGNNIGNREATVHELSKLIPYMWALAIITLPGGMIEITCWMYTS
QRQMSRMRMAYLRSVLSQDIGAFDTDLTTANVMAGATNHMSAIQDAIGEKLGHFLSNFST
FLVSIIVAFVCCWEVGMLSMLVVPMLLMVGATYAKMMIDASMKRIALVSAATTVVEQTLS
HIKTVFSFVGENSAIKSFTKLWVGAAAVVDRSAKGGETIAAVINILSAAIYISNAAPDLQ
SFSQAKAAGKEVFEVINRNPAISYESNGTILEKVTGNIEIREVDFMYPSRVDKPILRSFS
LSIPAGKVVALVGSSGCGKSTVISLVQRFYDPISGNILIDGQNIKELDLKSLRRSIGSVS
QEPSLFSGTIMDNLRIGKMDGTDEEIIEIAKSANVHSFVSKLPNQYSTEVGERGVQLSGG
QKQRIAIARAMLKDPPILLLDEATSALDSESEKLVQEALDGAMKGRTVILIAHRMSTIIN
SDKIVVVENGKVAQSGTHEELLEKSPFYSSVCSMQNLEKESGKSEERFTDQVREEQDNGS
GTSNEPSSTAHEQEKSLELNPNQPKQDIRNRASAFYRMFLGTFMLEPGKILLGSTAAAIS
GVSKPIFAFYIMTVAIAYFDPDAKRIVAKYSIILFLIGLLTFFSNIFQHYIYGLVGERAM
NNLREALFSVILQNEIGWFEQPKNSVGFLTSRVVGDTSMIKTIISDRMSVIVQCISSILI
ATGLSIGVNWRMGLVAWALMPCQFIAGLVQVRSAKGFATDTSTSHRKLISLTSEAVSNIR
TVASFGQEEEILKKADLSLQEPMQTSRIESIKYGVVQGVSLCLWHMTHAIALSYTIVLLD
KSLATFENCVRAYQAIALTITSITELWSLIPMVISAITILDPALDILDRETQIVPDEPKV
HCEDRITGNIEFQDVSFSYPSRQDVIILDGFSLAIEPGQRVALVGPSGAGKSTIVSLLLR
FYDPCRGQVLVDGKDIREYNLRFLRKQIGLVQQEPILFNLSIRENISYGNEGASETEIVE
AAMEANIHEFISGLSNGYDTVVGDKGSQLSGGQKQRIAIARTILKRPVILLLDEATSALD
GETEKVVMSSLAAKEWKSKEGELSNKITSITIAHRLSTVTSADVIVVMDKGEVVEMGSHE
TLVTTSNGVYSRLYCMQSKGMKD
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaagtccaagcaagctcaagaaggtattgaatcaagtatgtgcagatcttgag
agtggtgaagacaatgacaagggaaagaacatcttcggccccaatgctgctgctgctgct
cttctgcaaaccatcagaaggctcacaaaaacaatggcactcatccaagaaaaagatcac
cctgttgaaccctctaaacacatcagtgtggatgatgaggaaatcacttctccgccggtg
gaagaaaaggcagctgctgcggcggacaaaaagttcccattctttgggctgcttcgctat
gctgatggactagattggctgctcatggtagcaggaacaatggggtccttcctgcatggt
atggggccttcgatgtcatattacttggtcggcaaaggcatcgatgtggtcgggaacaac
ataggcaatcgggaggccacagtccatgaactctctaagttaattccttatatgtgggca
ttggcaattattacacttcctggtggaatgattgaaattacatgttggatgtataccagt
cagagacaaatgtcacgcatgcggatggcatacttgagatcagtgctgagtcaagatatc
ggagcttttgatactgacctaaccacagcaaacgtcatggctggagcaaccaaccatatg
agtgctatacaagatgcaattggtgaaaagcttggtcactttttgtcaaacttctccaca
ttcttagtttccatcattgttgctttcgtctgctgctgggaggtgggtatgctctccatg
ctggttgttcctatgctcctcatggttggagcaacatatgcaaaaatgatgattgacgca
tcgatgaaaagaatagctttggtctctgcagcaaccacagttgtagaacagactctttca
catatcaagactgtcttctcatttgttggagaaaattcggcaatcaaatcattcaccaaa
ttgtgggttggagcagctgctgtagttgatagatctgcaaaaggaggtgaaacaattgca
gctgtcattaacatcctctctgccgcaatatatatctcaaatgcagcaccagatcttcag
tccttcagccaagcaaaagctgctggcaaagaagtatttgaggttatcaatagaaatcca
gcgataagttatgaatcaaatggaacaatcctagagaaggtcactggaaatattgaaatt
cgagaggtggatttcatgtatccatccagagtcgacaagccaattctcagaagtttttca
ctatccataccggcaggcaaagttgtggctcttgtggggagcagtggatgtgggaagagc
actgtgatttctcttgttcaacggttctatgatcctatatcaggtaatattcttatcgat
ggtcaaaatattaaggaacttgatctgaagtccctcaggagaagtataggttctgtctct
caagaaccatcactattttccggtacgatcatggataacttgagaattggcaaaatggat
ggaactgatgaagagataattgaaatagcaaaatcagctaatgtgcactcctttgtatcc
aaactcccaaaccaatactcaacggaggtaggagaaagaggtgtgcagttatcaggaggt
cagaaacaaagaatagcaattgcaagggctatgctaaaagatccgccaattcttcttctt
gatgaagccacaagtgcacttgattcagaatcagagaagttggttcaggaagctcttgat
ggagctatgaaaggaaggacagttattttgattgcccacagaatgtcaacaatcataaat
tcagacaagattgttgttgtggagaatggaaaagtagctcaatctggaactcatgaagaa
ttgctggagaaaagtccattctactcgagtgtatgcagtatgcaaaatctagagaaggaa
tctggcaagagtgaagaaagatttactgatcaggtcagagaagaacaagacaatggaagt
ggaacaagcaatgagccgtcttctactgcacatgaacaagagaagagtctagaactgaac
ccaaaccaaccgaagcaggatatcagaaacagagcatctgctttctacagaatgttcctt
ggaacatttatgctggagccaggaaagattcttctgggctcaacagcagcagcaatctct
ggggtctcaaagccaatatttgctttctatatcatgaccgttgccatagcatactttgac
ccggatgcaaagagaatagttgccaagtactcgataattttgttccttattggattgctc
acatttttcagtaacatcttccagcactatatatatggccttgtcggtgaaagggcaatg
aataacctaagggaggccctcttttcagtcattctgcagaacgaaatcggttggtttgaa
caacccaagaacagtgtcggtttcctgacatcacgcgttgttggtgacacctccatgatt
aaaaccatcatatctgatcgaatgtcagtgattgtgcagtgtatctcttcaattttgata
gctacaggattaagcataggagtgaactggaggatgggtctggttgcatgggctctgatg
ccatgtcagttcatcgctggcctcgtacaagtaaggtcagcaaaaggttttgccactgac
acctctacatctcaccggaagctcatctcactcacttcagaggctgttagcaacattcgt
acagtggcctcttttggtcaggaagaggaaatactaaagaaagcagatttgtcgctgcaa
gaaccaatgcagacaagcaggatagagagcataaagtatggggtggtacaaggggtttcc
ctctgcttgtggcacatgacacatgccatcgcattgagttacaccattgtgctacttgac
aagagcctagcaacatttgaaaactgtgtacgggcctatcaagcaattgcactgacaata
acttccatcacagagttatggtctttgatccctatggttatatcggccatcacaatattg
gatcctgcactcgacattctcgacagagaaacgcagatcgtgccagatgaaccaaaagtg
cattgtgaagacagaattactggcaacattgagtttcaagatgtcagtttcagctaccca
tcaagacaagatgtgatcatattggatggattcagtctagctattgaaccaggccaaagg
gtagcattagttgggcccagtggtgcaggaaaatccacaatcgtatctcttctgctaaga
ttctatgatccttgcagagggcaggtacttgttgacggtaaggacatcagagaatacaat
ctgaggttcctaagaaaacagataggactagttcagcaagagccaatcttgtttaatttg
tccataagagagaacatcagctatggaaatgaaggtgcatcggaaacagaaatagttgag
gctgcaatggaggcaaacatccatgagttcatcagtggcctgtcaaatgggtacgacacg
gtggtcggggacaaaggaagccaactttcaggagggcagaagcagagaatagccattgca
agaactatactgaagaggccagtcatactactcctagatgaggcgacaagtgcgctggat
ggtgaaaccgagaaggtggtgatgagctccctggcagcaaaggagtggaaaagcaaggaa
ggtgagctatcgaacaagatcacgagtatcacaattgcgcacagactatccacagtcaca
agtgcagatgtgatcgtcgtgatggacaaaggcgaggtggtcgagatgggcagccacgaa
acattggtcacaacaagcaatggcgtttactcaagattgtactgtatgcaaagcaaagga
atgaaagactga
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integrated database retrieval system
