Oryza glaberrima (African rice): 127784396
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Entry
127784396 CDS
T08853
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127784396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127784396
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
127784396
Prokaryotic type
Archaeal type
TFB
127784396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_N
Ribosomal_S27e
zf-ribbon_3
RB_B
Motif
Other DBs
NCBI-GeneID:
127784396
NCBI-ProteinID:
XP_052167644
LinkDB
All DBs
Position
9:19815924..19818982
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AA seq
312 aa
AA seq
DB search
MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVG
GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG
LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK
KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL
DIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY
AKEEDLKNLCTP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactcgttctgcccggactgcaagaagcacacggaggtggcgttcgaccactcg
gcgggggacacggtgtgcacggagtgcggcctcgtcctggaggcgcactccgtcgacgag
acctccgagtggcggacgttcgccaatgagtccagcgacaacgaccccgtccgtgtcggc
ggcccgaccaacccgctcctcaccgacggcggcctctccaccgtcatcgccaagcccaac
ggcgcccagggggagttcctctcctcctccctcggcaggtggcagaaccgcggctccaac
cccgaccgctccctcatcctcgccttccgcaccatcgccaacatggccgacaggttaggt
cttgtggctacaatcaaggaccgagccaatgaaatatataagaaggtggaagatctcaag
tctatcaggggaagaaatcaagatgctatattagctgcctgtttgtatattgcttgtaga
caagaggatcggcctagaactgtaaaagaaatatgttcggtcgctaatggagcaacaaag
aaagagataggccgagcaaaggaatttatcgtgaagcaactggaagttgaaatgggtcaa
tctatggagatgggaaccatccatgctggagatttcctgaggcgtttctgttcaactctt
gggatgaacaatcaagctgttaaagcagcccaggaagcagttcagcgttcagaggaactt
gatataaggaggagtcctatttccattgcggctgctgtcatttacatgataacccaactc
tcagatgataagaagcctctgaaagacatatccttggctactggtgtggcagaaggtacc
atcagaaattcatacaaggatctgtatccctatgcttcaaggctcatcccaaacacctat
gccaaggaggaagacctgaagaatctgtgcacaccatag
DBGET
integrated database retrieval system
