Oryza glaberrima (African rice): 127784783
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Entry
127784783 CDS
T08853
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogl03009
]
127784783
03036 Chromosome and associated proteins [BR:
ogl03036
]
127784783
Enzymes [BR:
ogl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127784783
Ribosome biogenesis [BR:
ogl03009
]
Eukaryotic type
Pre-60S particles
Helicases
127784783
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
127784783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
SR-25
CMS1
Motif
Other DBs
NCBI-GeneID:
127784783
NCBI-ProteinID:
XP_052168113
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All DBs
Position
9:19154284..19158698
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AA seq
696 aa
AA seq
DB search
MPSLPVAAAEPMAVDESASKKSKRKLKAAEVEVEASSRKKEKKEKKRKAKEPSPSSSSSS
EEEERSSTSSDEPAPAAKKAKKEKTKEKVVVEEEDDDDDEGELTASGDEDPADPNALANF
RISEPLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNG
THKASRRTDYGRPPTVLVLLPTRELAKQVHTDFAFYGATFGLSACCVYGGSDYRSQEMAI
RKGVDIVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVELILGKVEDVTK
VQTLLFSATIPEWVKKLSLRFLKSGKKTVDLVGDEKLKASASVRHLALPCNRAARAQVIP
DIIRCYSRGGRTIIFTETKESASDLSGLIAGSRALHGDVAQAQREVILAGFRSGKFLVLV
ATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEPRYKFNVNRI
ERESGVKFEHISAPQPTDVAQSAGTEAAEAISSVSDSVIPVFREQAEQLLNSSGMSAVDL
LAKALAKAVGYTDIKKRSLLSSMDNHTTLLLQTGRSVYAAGFVLSTLKRFVPEERLADVK
GITITADGTGAVFDVPSAEVEDYIQGAQNAAMVTVEEVKQLPPLQEREQSGGSRGGGRFG
NRRFSGGGGGRGGGGRGFGGGRGRGGGGGNRFNKRY
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctccccgtcgccgccgccgagccgatggccgtcgacgagtcggcctccaag
aagtcgaagcgcaagctgaaggcggcggaggtggaggtggaggcctcgtcgaggaagaag
gagaagaaggagaagaagcggaaggcgaaggagccgtcgccatcgtcctcctcctcatcc
gaggaggaggagaggagcagcacgagctccgacgagccggcgcccgccgcgaagaaggcg
aagaaggagaagacgaaggagaaggtggtggtggaggaggaggacgacgacgacgacgaa
ggggagctcaccgccagcggcgacgaggatcccgccgaccccaacgcgctcgccaacttc
aggatctcggagccgctcagggagaagctcaagtccaaggggatcaaggcgctgttcccc
atccaggccaccaccttcgatctcgtcctcgacggccacgacctggtcggccgcgcgcgc
actggacagggaaaaacattggcttttgttctaccgatacttgagtcattagttaatggg
acacacaaggcatccagaaggactgattatggcaggcctccaactgttttggttctgttg
cctaccagagagctagccaagcaggtgcacacagactttgcattttatggtgcaacattt
gggctatctgcatgctgcgtatatgggggttctgattatcgttctcaagaaatggcaatc
agaaagggggttgacattgttgttggaactcctggtcgtgtgaaggactttgttgaaaag
ggaaccctcaattttaggtctttgaaattccgtgtccttgatgaggctgatgagatgctt
aatatgggcttcgttgatgatgttgagcttattcttggcaaagttgaagatgttacaaaa
gtacagacacttctcttcagcgctactataccagagtgggtgaagaagctctccttgaga
tttctcaaatctggaaagaaaacggttgatcttgttggagatgagaaattgaaagctagt
gcatctgttaggcatcttgctcttccttgtaaccgtgctgcaagggctcaagttattcca
gacatcatccgatgctatagccgtggaggccggaccattatctttaccgagacaaaagaa
tctgcatcagacctctctggtttgattgctggatcacgtgccttgcatggtgatgttgct
caagctcagcgtgaagttattcttgctgggttcaggagtggcaagtttttagttttggtt
gctacaaacgtggctgcacgagggctggacattaatgatgtgcagcttatcattcagtgt
gaacctccacgtgatgttgaagcctacatacaccggtcaggtcggactgggagagcaggc
aatactggtgttgctgtcatgctttttgaacccagatataagttcaatgtgaacagaata
gaaagggagtctggggtcaaatttgaacatatctctgcaccacagccaactgatgtggca
caatctgctggtactgaagcagcagaagccatttccagtgtttcagacagtgtcattcct
gtttttcgggagcaagctgagcaactattgaactcttccgggatgtctgcagttgatcta
ctagccaaagcacttgcgaaggcagttggctacacggacataaagaagagatccttgctg
tcttctatggacaaccacactacattacttcttcaaactggtcgatcggtgtatgcagct
ggatttgttctttctactttgaaaaggtttgtgccagaagagagacttgcagatgtaaag
ggtataaccatcactgctgatgggacaggtgctgtatttgatgttccttcagcagaggtt
gaagactatattcaaggtgcacagaacgccgccatggtgactgtcgaggaagtgaaacaa
ttgccacccttgcaagagagggaacagtctggtggcagccgaggtggaggaaggtttgga
aacaggagattttctggtggtggtggtggccggggcggaggcggcagagggttcggtgga
ggcagaggcaggggaggtggcggcggcaacaggtttaacaagaggtactag
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