Oncorhynchus gorbuscha (pink salmon): 123990898
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Entry
123990898 CDS
T07892
Name
(RefSeq) protein PALS1-like
KO
K06091
MAGUK p55 subfamily member 5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
123990898
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
123990898
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
PDZ domain-containing proteins
MAGUK family proteins
123990898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
PDZ_6
L27
SH3_2
PDZ_2
SH3_1
SH3_9
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
123990898
NCBI-ProteinID:
XP_046147850
LinkDB
All DBs
Position
LG12:complement(33198614..33232805)
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AA seq
684 aa
AA seq
DB search
MITSHRNGGPGYVIEDPMGPVSGTEGRGSEAKLQQRERAVDCPPGDKVVGTGSSVVQGSR
CSAQMERIQRYQEELRRKREENANKGKHEINLNASLRLKKLAQNPAKTGIDNPTFEAPKA
GKETEDGSPPLGGDTVEELEELLEALRRVQSCLVDAQSQADVALVLGLLHKEDFQSAFAV
HSAVAQQMQPRGSPPLPLTAQARSLYQEVQCILQSSHQEEGVELRSLLTTPHFQALMQAH
DSVAEQELEPDPEERLIQYLGETVKLVRLEKASDIPLGATVRNEMDSVVVSRVVKGGTAE
RSGLLAEGDEILEINGVPVRGKNVNEVHDLLVEMHGTLTFLLIPSSQNKTPSHRQTVMHV
RAYFNYDPSDDPYVPCRELGLSFQKGDILHIISQDDPSWWQAYRDGDEDNQPLAGLVPGK
SFQQQREAMKKNIVDRNPDSPGKLWCAMKNKKQRKKTMYNPNRSVDYYADEILTYEEMAL
YHQPANRKRPIALVGPPNSGQDELRQRLLSIEPDRFAMAVPHTTRNPRVHEKNGREYHFV
NQLAFEADVAAGKFIESGEYERNLYGTSSDSVRQVINSGRIGLLCLHTKSLRVLRSSNLK
PYVIFIAPPSQERLRTLLAKDGKNPKPEELKELIEKAREMEQAYGHLFDAAIVNGEPDTA
FHELLRLINKLDTEPQWVPSSWLC
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttcccacaggaacggaggacccggatatgtaatagaggacccaatggggcct
gtgagtggcacagagggtcgtgggagtgaagccaagctgcagcagagggagagggctgtg
gactgcccccctggggacaaggtggtggggactgggagcagcgttgtgcagggttcccgg
tgcagcgcccagatggagaggatccagaggtaccaggaagagctgaggaggaagagggag
gagaacgccaacaaagggaagcatgagatcaatctcaacgcctcactcaggctcaagaag
cttgcccagaacccagccaagacgggtatcgacaaccctacgttcgaagcgcctaaggcg
ggcaaggagaccgaggatgggagccccccgcttggcggggacacggttgaggagctggag
gagctgctggaggccctgcggcgggtgcagagctgcctggtggacgcccagtcgcaggcc
gacgtggctctggtgctgggcctgctgcacaaggaggacttccagagcgccttcgccgtc
cacagcgccgtggcccagcagatgcagccgcgtggcagcccgcccttgcccctcaccgcc
caggcccgcagcctttatcaggaggtgcaatgcatcctacaatccagtcaccaggaggaa
ggtgtagagctcaggagcctactcaccaccccccacttccaggctctgatgcaggcacac
gacagtgtggcggagcaggagttggagccggacccagaagagagattgattcagtacctg
ggtgagaccgtcaaactggtgcggctggagaaggccagcgacattcctctgggcgccacg
gttcgtaacgaaatggacagcgtggtggtgagtcgtgtggtaaagggcgggacagccgag
cggagcggtctcctggctgagggagatgagatcctggagatcaacggcgtgcctgtccgc
gggaagaacgtcaacgaggtccacgaccttctggtggagatgcatggcactctgaccttc
ctccttatccccagttctcagaacaaaacaccctcacacaggcagactgtgatgcacgtg
agggcttactttaactacgacccgtctgatgacccatacgtgccgtgcagggagctgggc
ctgtcattccagaagggagacatcctccacatcatcagccaggatgaccccagctggtgg
caggcctacagggacggggatgaggacaaccagcccctagccgggctagttccagggaag
agcttccagcagcagagagaagctatgaagaaaaacattgtggacaggaatcctgacagc
ccagggaagctttggtgtgcaatgaagaacaagaagcagaggaagaaaaccatgtacaac
cccaacaggagcgttgactactacgccgacgaaatcctgacctatgaggagatggcactc
taccaccagccggccaatcgcaagcgacctatcgccctggttggtccacccaacagcggg
caggacgagctgcggcaaaggctgctgtccatcgagccggacaggttcgccatggccgtg
ccacatacaactagaaacccacgcgtacacgagaagaacgggagggaataccactttgta
aaccagctggcttttgaggcggatgtggcagcggggaagttcattgagtctggggagtac
gaaaggaacctgtacggcaccagcagtgactcggttcgacaggtcatcaactcaggcagg
atcggtctgctgtgcctgcacactaagtcactgcgggtactgcgatcctccaacctcaag
ccctatgtgatcttcattgcgcctccctctcaggagcgattgcgcaccctgctggccaag
gatggcaaaaacccaaagccagaggagctgaaggagctgattgagaaggcccgtgagatg
gagcaggcctacgggcacctgtttgacgcagccattgttaacggcgagccagacacggca
ttccacgagctcctgcggctcatcaacaagctggacacggagccccagtgggtgccctcc
tcctggctgtgctag
DBGET
integrated database retrieval system
