Oncorhynchus gorbuscha (pink salmon): 123991064
Help
Entry
123991064 CDS
T07892
Symbol
crocc2
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
123991064 (crocc2)
Cilium and associated proteins [BR:
ogo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
123991064 (crocc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
CENP-F_leu_zip
Crescentin
Motif
Other DBs
NCBI-GeneID:
123991064
NCBI-ProteinID:
XP_046148188
LinkDB
All DBs
Position
LG02:complement(4729362..4930492)
Genome browser
AA seq
1976 aa
AA seq
DB search
MSSQGDQREPTSPGLEAVIQKLEESLLSSLPDRSSRVEGSNLSLTPRGDGQETAAAKLAA
SPVSGSACSTVTPVSSRIRQILTRNLADPNPADDDISLQEENSVLKEQLSQTRMDRDQLL
EKQTQLTDRLEQMLALQSATGDSDQASVSVERLRLQNGERAYRQKLQAYQEGQHRQAQLV
QKLQTKTLQYKKRCGELEEQVLEKTSESERLQLSLQAQLDSSVHRLHRTETQLQNNSRTI
QSKLAMLEEEQKRCAGLSQVNALLREQLEQASSANQSLTESLRRASDDLEQKDARLRKEQ
ETCAFRAGREQARVRALWRQAASLRSTFTQLRTFADRSLSDIRGECVTASRSLHVACMSL
EASVTPHIAPSGLEVSELERQLRDKLREAMQLQGHWDAEKVELNSRILELTDMVKHLRAQ
NSEKDTGLAAMQTSLDRMERSRAEDRAETDDFQKVLTSITQLVHGGEDGYVSGGQPSSSS
SSPLRGRNSQCNSTLMAVKGLLSQNQIQAQDLRSRLDAALEQVDILQSNLQEEEEERRDL
ERKMKEVHREKQQVEKSLEEKHRDNQRFHTSLDLLNSEKVSLEKLVVGLQQKTESLGAEL
EVMRGSAGDLQRQRDLLRQQRDDLERQLERQRTEAQRGERSLEQLDGKNSDLRRELVTVR
EALSQVTLQKEVLDDEKSSLTLALSKMESQSAEQELSVTKLQYQGASLRDSLAKMAALSE
GLANDKVELNRILLQIEGEKAELGERRREAEVERASAREEMGRLQQELQDLIADRRSLES
SYSLLQETNQRLEAELALLQRENNQILEQHAQVNKQVQSLSDQLTSCRRELDSKAVALQR
AHHDREDVAKDKASLGVQLTAVDRRAWGLEQELAILRAEKESLETCVFEGQELVSSLEGE
RNRLEVERSTLTMADEDLTREVARLKAEVELQVSRAAQEREELETKLAHAERNHRIALST
KEHSHREQLEKEHADKEQQCLNLTLQRERAESQLRSHCEQQRLQSQADLQQLQEEMVRLQ
QVCNNSLLQAESTKQLALSQKEGEKAALTERLAGLQQDLETARLEMERGRRDALSLHEQD
KDSISGLRCELQSLRSRFEESLSSHESSEKSLTEQVRELNQQRETARHEVEGLRRDLHRA
EDESDAGREELIESHRELREVAQERDDQRKEVLDLRRLLGDEIRDKEAIHSSNQELRAAV
KRAENDNNSLRRSLEDKEQKVVVLEVCKTSLQQEVSKLRSTMRELEKSRLQARRELQELR
RQVKILEREAAQQREEMGELQARVCQEEVKEEEARRESFSLKQRVLESEAGREAAIKEAS
GLQRRVVELEDAERQMREVLAEREAGLQQSLLLHCEETSQLVLALEEQSTQVRELTLRVS
LAEGRAQGLEEQLGHGEGQRRELEHRLVGLTSALRRTLGIGRSQTPGSRGRSPSPWRSRS
PVKGETSTSPGGPVSFPSCSDEGELDVDAVQRALRDFHQELKDTKRHRDEAKAHVTSLTR
QVAELQTSQDESGTRLQQLTKALKGLEEGKREVSEQLYGAQTSLSLQEEVTRRGDRDRKS
LAEEVVKLKTSLQTFEANSRTLQEKLDRSRAGEARCEGERRRLKEALETAESRASRLELS
QRTLEGELERAQRRAAELEGEVAALGERLAELRRELGVTEDRAAGLRVNEERLATALAWA
ELQEGQLREQLQGLSTSLNDSSATVGAMQEQTTQLQMALTVSDQDRRLMQERVDKLREAL
SNSKRQNHSLTERIQSLLRTQEDTDLRASELEKQTRTLKKMVKQRQESAEFAAQENSTLQ
QKDREELQERLSGLHSTLKKMEGERAELENLLARLGKDKASLRKTLEKVELERLRREEEA
TTAAREREQLGQTVLSLEQEVNHRQLEIQTVQAQMTQLERSHAQHLLEVTSHHRREMDSE
TERLRATQLQAERALETRERAHRQRVTVLEEQVLTLKEQLDQEMRRRQAYVNQILR
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcaaggagaccaacgcgaaccaacatcacctggactggaagctgtgattcag
aagctggaggagtctctactctctagtctccctgacagaagcagcagggtagaggggagt
aacctgtctctgacaccaagaggagatggacaggaaactgctgcagccaaactcgctgcc
tcgcccgtctcaggctccgcctgctctacagtaacacctgtctcctcccgcatcagacag
atcctcaccaggaacctggctgaccctaaccctgcagatgatgacatcagtcttcaggaa
gagaacagcgtactgaaggagcagctctctcagaccaggatggaccgggaccagctactg
gaaaaacagacccagctcacagacaggcttgaacagatgctagctctacagtccgcaacg
ggggactcggaccaagcgagtgtgtctgtagagcgcctgcggctgcagaatggggagagg
gcctacaggcaaaaactacaggcctatcaggagggacaacacagacaggctcagctggtg
caaaaactgcagaccaagacgcttcagtacaagaagagatgtggtgaactggaagagcag
gtgttggagaagacctccgagtcagaaagactacaactctcactacaggcccaactggac
tcgtcagtccaccgcctgcaccggacagaaacacagcttcagaacaacagcagaaccatc
cagagcaaactggccatgttggaggaagaacagaagaggtgtgccggtctcagtcaggta
aacgccctgctcagagaacagctggaacaggcgagctcagccaatcagagcctgacggag
agcctgcgcagagccagtgacgacttggagcagaaagatgctcggctgcgcaaagaacaa
gagacgtgtgccttccgggcgggtcgtgagcaggcccgtgtgagggccctgtggcgccag
gcagcctccctacgaagcaccttcacccagctcaggaccttcgctgacaggagtctgtct
gatatacgtggggagtgtgtgactgcgagccgtagtctacatgtggcctgtatgtctctg
gaggccagcgtcacaccgcacatcgcccctagtggcctggaggtgtcagagctggaaagg
cagctcagggacaagctgagggaagccatgcagctgcagggacactgggacgctgagaaa
gtagagctcaactccaggatcctggagctgacagatatggtaaaacatctcagagcccag
aacagtgagaaggatacaggccttgctgccatgcagacaagtctggacaggatggagaga
agcagagcggaggacagggctgagacggacgactttcagaaggtcctaaccagcatcaca
cagctggttcatggtggtgaggatggttatgtctctggtggtcaaccttcgtcctcctcc
tcctcacctctccggggccgcaattcccaatgcaacagcaccctgatggctgtcaaaggt
ctcctctcccaaaaccagatacaagcacaggacctgcgtagccggctggatgcagccctg
gagcaggtagatattctacaaagtaatctgcaggaggaggaggaggagaggagggacctg
gagaggaagatgaaggaggtgcacagggagaagcagcaggttgagaagagtctggaggag
aaacacagagacaaccagaggttccacacctccctggacctcctcaacagtgagaaggtc
agcctggagaagctggttgtgggcctccagcagaagacagagtccctgggggcagagctg
gaggtgatgagggggtcggctggggatctccagagacagagagacctgctccgccagcag
agagacgacctggagagacagctggaacgccaacgcaccgaggcccagagaggtgaacgg
agtctggagcagctggatggaaagaacagtgacctgcgcagggagctggtgacagtcagg
gaggctctgagtcaggtcaccctgcagaaggaggtcctagatgatgagaagagtagcctc
accctggctctcagcaagatggagtcccaaagtgcagaacaggagctgtcagtcaccaag
ctacagtaccagggggctagcctaagagactctctggccaagatggctgccctgagtgaa
ggcctggccaacgacaaggtggagctcaaccgtatcctgctacagatcgagggtgagaag
gcggagctaggtgagcgtcgtcgggaggcggaggtggagagggcttcggccagggaggag
atggggaggctgcagcaggagctccaggacctgatcgctgacagacggtccctggagagc
tcctatagcctcctgcaggaaaccaaccagagactggaggctgaactggcactgctgcag
agggagaacaaccaaatcctggaacagcatgcacaggttaataagcaggtccagtccttg
tccgaccaactgacttcctgccgtagagagctggacagcaaggctgtggccctgcagagg
gcccatcatgacagagaggatgtggccaaggacaaggccagtctgggggtccagctgact
gccgttgaccgcagggcatggggcctggaacaggagctggcgattctcagagcggagaag
gagtctctagagacgtgtgtctttgagggccaggagctagtgtcctctctggagggggag
aggaaccgactggaggtggagcgaagcaccctaacgatggctgacgaggacctgacgcgc
gaggtggcccgtttaaaggcggaggttgaactgcaggtgtcccgggcggcgcaggagaga
gaggaactggaaaccaagctggctcatgcagagaggaaccaccggatagccctcagcacc
aaagaacacagtcacagagaacaactggagaaggaacacgccgacaaggaacagcagtgt
ttgaacctaaccctgcagagggagcgtgcagagtcccagctacgatcccattgtgagcag
cagcgtttgcagagccaggctgacctgcagcagctgcaagaagagatggtccggttgcaa
caagtctgcaacaacagcctgctgcaggccgagagcacaaaacaactggccctgtcccag
aaggagggcgagaaggcagccctgacagagaggctggcaggcctacagcaggatctggag
acagcaaggctggagatggagagaggcaggagagatgctctgagccttcacgaacaggac
aaggacagtatatcaggtcttcggtgtgagctgcagtccttgcgttctcgcttcgaggag
tctctgagttcccatgagtcatcagagaagagtctgactgagcaggtcagagagctcaac
cagcagagagaaacagcacgacatgaggtggagggtcttcggcgggacctccatcgggca
gaggatgaaagtgacgcagggcgggaagagctgatcgagtcccacagggagctgagggaa
gtggctcaggagagggacgaccagaggaaggaggtgctggacctcaggaggctgctgggg
gacgagatccgagacaaggaggccatccactcctccaaccaggaactcagagctgcagtg
aagagagcagagaatgacaacaacagtctgcggcgtagcctggaggacaaggagcagaaa
gtggtggtgctggaggtgtgtaagacctccctgcagcaggaagtgtccaagctgaggagc
acaatgagagagctggagaagtcccggctgcaggcacgcagagagctgcaggagctacgc
agacaggtgaagatcttagagagggaggctgcccaacagagggaggagatgggagaactg
caggccagggtgtgtcaggaggaggtgaaggaagaggaggcaaggagggagtccttcagt
cttaaacagagagtcctggagagcgaggcgggcagggaagcggccatcaaggaggcttct
gggttgcagcgtcgtgttgtggagctggaggacgcggagcgtcagatgagggaagtgctg
gcggagagagaggcggggcttcaacagagtctcctcctccactgcgaagagacctcacaa
ttagtgttggcactagaggagcagtctactcaggtaagggagctcaccctgcgtgttagc
ctagcagagggccgtgctcaggggctggaggagcagctaggacatggggaaggccagcgc
agagagctggagcacaggctggtcgggctgacctctgccctgagacgaaccctcgggata
ggccgctcacagacccctgggtccagaggaagaagcccctccccctggagaagtcgctca
cctgtgaagggtgaaaccagcacatccccgggaggtcctgtgtccttcccatcctgtagt
gatgagggggagctggatgtggacgcggtgcagagagccctcagggacttccaccaggaa
ctcaaagacactaagagacacagggatgaagctaaggcccacgtgaccagtctaacccgg
caggtggccgagctacagaccagccaggacgagtcaggcactaggctgcaacagttgacc
aaagccctgaagggcctggaggaggggaagagagaggtgtcggagcagctgtacggggct
cagacctccctctccctgcaggaggaagtgacacggcgaggggacagggacaggaagagc
ctggctgaggaagtagttaaactcaagaccagtctgcagacctttgaagctaatagtagg
acactgcaggagaagctggatcgttcccgggccggggaggctcgctgtgagggggagcgt
cggaggctgaaggaggccctggagacagcggaaagccgggcatcacgtctggagctctcc
cagaggaccctagagggagagctggaacgggcacagcggagggcagccgaactggaagga
gaggtggcagccctgggggagaggcttgcagagctgaggagagagctgggggtgactgag
gaccgggcggctgggctgagggtgaacgaggaacggctggctacggccctggcctgggct
gagctccaggagggccagctgagagagcagctccaggggttgtccacctctctcaatgac
agtagtgccactgtaggagccatgcaggagcagaccacccagctgcagatggctctcacc
gtctcagaccaggaccgaaggctcatgcaggagcgtgttgataagctgcgtgaagccctg
tctaacagtaagagacagaaccattccctgactgagaggatccagagcctcctgagaaca
caggaggacactgacctacgggcctcggagctggagaaacagacccggactctgaagaag
atggtgaagcaaaggcaagagtctgcagagttcgctgcccaggagaactctacgctacag
cagaaggacagggaggagctccaggagaggttgtccggcctccacagcaccctgaagaag
atggagggagagcgggcagagctggagaacttgctggcccgtctggggaaagacaaggct
tcactcagaaagactctggagaaggtggagttggagaggttgaggcgggaggaggaggca
acaacagcagccagagagagagaacagctgggccagacagtactcagcctggagcaggaa
gtcaaccaccggcagctggagatacagacggtacaggcccagatgacccagctggaacgc
tcccatgctcagcacctcctggaggtgacgtcccaccatcgccgggagatggactcggag
acagagaggctgagggcgacgcagctacaggcggagagggctctggagaccagggagaga
gcccatcggcagagggtcacagtcctggaggagcaggtgctgacgctgaaggagcagttg
gaccaggagatgaggaggaggcaggcctacgtcaaccagatactgagataa
DBGET
integrated database retrieval system