Oncorhynchus gorbuscha (pink salmon): 123992618
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Entry
123992618 CDS
T07892
Name
(RefSeq) leucine-rich repeat-containing protein 4-like
KO
K16351
netrin-G2 ligand
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
123992618
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
V-set
ig
LRRNT
Ig_2
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
123992618
NCBI-ProteinID:
XP_046149865
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Position
LG02:complement(35503306..35508298)
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AA seq
687 aa
AA seq
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MSPVGQVSLQPTWNAVLLTLLALTMVPALSLYQPVGLGAPSNPQNCPAVCSCTNQLAKVV
CTRRGLVRVPPGIPTNTRYLNLMENSIETIQADTFRHLHHLEVLQLGRNAIRQIEVGAFN
GLTSLNTLELFDNRLTGIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE
LRRLDYISDGAFEGLQNLKYLNLGMCNLMEMPVLSPLTGLEELEMSENTFPEMKPGSFRG
LCSLRKLWIMNSGITVIERNAFDDITALVELNLAHNNLSSLPHDLFAPLQYLVELHLHHN
PWRCDCDVVWLSWWLREYIPTNSTCCGRCHSPAHMRGRYLVEVDQTTFQCSAPFILDAPR
DLNISAERVAELKCRTASMSSVRWLLPNGTVLTHGSAHPRISVLNDGTLNFSNVLPSDTG
VYTCMVTNMAGNSNASAYLNVSNAELNTSNLSYFTTLTVEVLEPTVEEIPKPKPTIPASP
SVFQPVFISTPTVLLQNTQTPRQISLPTARGPIHPPPSLDEVMKTTKIIIGCFVAVTLLA
AAMLIAFYKLRKQHQQRSTVAAARTIEIIQMDEELPQVPSARSGSSGSEETGLALPMLLE
HNSTVFNKEYISSSSSSSHRDRDRHRDRDRDRAAYGAHWTHNNLGNSLHRSSSRQYYQQH
HSLISTIAEPYVIKPTHTKEKVQETQI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctgtgggccaggtttctctgcagcccacctggaacgcagtcctgctcaccctg
ctagccctcaccatggtgccagctctcagtttgtaccagcctgtcggcctgggtgctccc
tctaacccccagaactgcccggcggtgtgctcctgcaccaaccagcttgctaaggtggtg
tgtacgcgccgtggcctggtcagggtgccccccgggatccccaccaacaccaggtacctc
aacctgatggaaaacagcatcgagaccatccaagctgacaccttcagacacctacaccat
cttgaggtgctgcagctgggcaggaacgccatcaggcagattgaggtgggggccttcaat
ggcctgaccagcctcaataccctggagctgtttgacaacagactgacggggatccccagc
ggggcctttgagtacctgtccaagctgagggagctgtggctgaggaacaaccccatcgag
agcatcccgtcctatgctttcaacagggtgccctctctgatgaggctagacctgggcgag
ctcaggaggctggattacatctctgatggggcatttgagggcctgcagaacctcaagtac
ctgaatctggggatgtgtaaccttatggagatgcctgtcctgtcacccctgacaggcctg
gaggagctggagatgtctgagaacactttccctgagatgaagcctggctcgttccgtggc
ctgtgctccctacggaaactctggattatgaactctgggatcaccgtgattgagaggaac
gctttcgatgacattacggcgctggtggagctgaatctagcccataataatctgtcgtct
ctcccccatgacctctttgccccgctgcagtacctggtggaacttcatctccaccacaac
ccctggaggtgtgactgtgatgtggtctggctgtcctggtggctcagggagtacatcccc
actaactccacctgctgcggccgctgccactcccctgcccacatgagaggacgatacctg
gtggaggtggaccagaccacattccagtgctctgctcccttcatcctggatgctcccagg
gacctcaacatctctgcagagagagtggctgaactcaagtgtcgcacagcctccatgtca
tcggtccgatggctgcttcctaatgggaccgttctgacccatggctcggctcaccctcgg
atttctgtccttaacgacggaacactcaacttctccaacgttctgccatcggacacaggc
gtctacacctgtatggtgactaacatggcgggtaactccaatgcctcggcctacctgaat
gtcagcaatgccgaactcaacacctccaacctttcctatttcactacactgactgtggag
gtgctggagcccaccgtagaggagatccccaaacccaaacccaccatcccagcctcgccc
tccgtgttccagcccgtcttcatctccacacccactgtgttgctccagaacacccagacc
ccccgccagatatctctccccacggcccgtggccccatccaccctccccccagcctggat
gaggtcatgaagacaaccaagatcatcattggctgcttcgttgcggtgacactcctggct
gctgccatgttgattgccttctacaagctgcgtaagcagcaccagcagcggagcacggtg
gcagcggcacggaccattgagatcatccagatggacgaggaacttccccaggttccatca
gccagatcaggttctagtgggtctgaggagactgggctggctctgcccatgttactggaa
cacaacagcaccgtcttcaataaggaatacatctcgtcgtcctcatcatcctcccacaga
gacagggacagacacagagacagggacagggacagagctgcctacggggctcactggacc
cataacaacctgggaaactccctgcatcgctcctccagccgccagtattatcagcagcac
cacagcctcatcagcaccatcgcagagccgtacgtcattaagccaactcacaccaaggag
aaggtccaagagacccagatctag
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