Oncorhynchus gorbuscha (pink salmon): 123993519
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Entry
123993519 CDS
T07892
Name
(RefSeq) rap guanine nucleotide exchange factor 2-like isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
123993519
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
123993519
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
cNMP_binding
PDZ_2
Motif
Other DBs
NCBI-GeneID:
123993519
NCBI-ProteinID:
XP_046151693
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All DBs
Position
LG13:74888338..75045780
Genome browser
AA seq
1660 aa
AA seq
DB search
MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMEENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPTGKPPIVRGYHTECSKA
QLPADFSRLHLADGLHPQVTHVSSSHSGCSVTSDSGSSSLSDIYQATENEPGDMDLSGLP
ETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPEARPEILCMGNSF
GVSPTIEKEYMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTKERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGNKLLEW
FHDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTHFLEEFENNLEREVRVSKMYGHLRLLNI
ACAAKAKLRLVTLTKPSREAPLAFTLLGGSEKGFRIFIDSVEPGSKAAEAGLKRGDQILE
VNGQNFDNVQLTKANEILRNNTHLSISVKTNLLVFKELLARPEHDHEAEGEEPPEVDRKN
GAPAHLPKIGDIKKGSRYSIPDLAVDVEQVMGLEKASKKAKANTVGGRNKLKKIFDKTLT
SILPPKPYNDVGVGQSQDDSIVGLKQSKQIPAALPVSGSLSSSNPDLLQSHHRILDFNNQ
PAPVVTNMSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAVPEAYSLCDVSI
TPEGVIKQRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLS
TMEVATQLSMRAFELFCAIEPTEYIDDLFKLKSKTGSFCLKRFEEIINQETFWVASEVTR
EPNQLKRMKTVKHFIKIALHCRECKNFNSMFSIISGLNLAPVSRLRGTWEKLPSKYEKLF
GDLQDLFDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKL
RMIAKEIRHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVR
RSSFLNAKKLYEDAQMARRVKQFLSNLSLETNEEALQTLSLQCEPSINTLPKNAGGSKRP
DTSPVVSRAASQQRGQLQKGNQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSL
SEEASKRQTEDTVTSNNTSQLSSPPTSPQSSPKKGYPRTGDAYSDSCHSEISSRSSLVSN
SSFDMAQEERRGLRHSGGVGDPHAGGVRLERRATTDPDQYSLGSYSSMQDCRGLYTCATV
LSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQGRSWETLAFGPGGVVS
VGVHPPGGPEAFIGVPSGMWASQARGSWASASSSSSSAAYWGEDSEGDTGTIKRRGGKDV
NADPETSSITSMGSDEAKQHGRPSPITAGNKGLITRKESRYREPPPTPPGYTALTISDFS
EGQTQSPPPPTAPSHSGRRPPDYSTALQRSRMVTQSPDSQHHHQAQQHPGSGTTKRHGLH
RTRSPDEDEEPEEEEGESLSPKLVALRKTVAHTTPETTRP
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggataacagttttcgtcaagctgtgatgatgaatccggcggaaaga
acgcaacaggacctggagatagtctactcctatctgcatggaatggaggccctgtctaac
ctccgagaacaccagctgaggataatgtgtgagacagtgcgctatgaaagacacgaagcc
aatgaagtgctctattacccggatgacatcggaagctgctggtacatcctactgtccggg
tctgtcttcatcaaggagtccatgttcctgccaagaagcagttttgggaagcgttctgca
gggagcctgagacgtggatgtgagtgcatcgttctggaaccttcggagatgattgtggtg
gactatatggaggaaaatgaggagtacttccagaggcaagcatcacatcgtcagtcccgc
cgcaggttccgcaagatcaaccagaaaggcgagcggcagaccatcatcgacacggtggac
ccataccccaccggcaagccacccatagtcaggggatatcacacggaatgcagtaaagct
cagctccccgcagacttcagccgactccacctggccgacggcttacacccacaggtgacc
cacgtgtcttccagccactcaggatgtagtgtcaccagcgactctggaagcagcagcctg
tcagacatatatcaggccacggaaaacgagccaggcgacatggacctcagcggcctgccc
gagaccgccgtcgactccgaggatgacgatgacgaggaggacattgagcgagcgtcggac
cccctcatgagccgcgacatcgtgcgggactgcctggagaaggacccaatggaccgcacc
gatgacgacatagagcaattactggagttcatgcatcagctgccagcgtttgccaacatg
accatgtctgtgaggagggagctgtgtgccgtcatggtgtttgccgtggtcgagcgggcc
ggcaccatcgtactcaatgacggggaagagctggactcgtggtcagtgatcctgaatggc
tcggtggaggtgacgtaccctgaggccaggcctgagatcctgtgtatgggcaacagcttc
ggggtctcccctaccatagagaaggagtacatgaagggagtgatgaagactaaggtggac
gactgtcagtttgtgtgcatagcgcagcaggactactgctgcatcctcaaccaggtggag
aagaacatgcagaaggtggaggaggagggcgagatcgtcatggtcaaggagcaccgtgag
ctggaccgcaccggcaccaggaagggacacatcgtcatcaagggcacgaaggagcgtctg
actatgcacctggtagaggagcactctgtggtggaccccacctacatcgaggacttcctg
ttgacctacaggactttcctctccagccccatggtcgtgggcaacaagctcctcgagtgg
ttccacgacccaagcctcagggacaaggttacacgggtagtcttgctgtgggtgaacaat
cacttcaatgactttgaaggcgaccctgcaatgactcactttcttgaagagtttgagaac
aatctggagagagaggtccgtgtctcaaaaatgtacggccaccttagactgttaaacatt
gcctgcgctgctaaagccaaactgcgactagtgacactgaccaagccatccagggaggcc
ccgctagccttcaccctgctggggggctccgagaagggcttccgcatcttcatcgacagc
gtggagcctggaagcaaggccgcggaggccggccttaaacgaggagaccagattctggag
gtgaacgggcagaactttgataatgtccagctcacgaaagccaatgagatcctgaggaac
aacacccacttgtcaatttctgtgaaaactaatcttttagtgttcaaggagctccttgcc
cgaccagagcacgaccacgaggcagagggtgaggagccgccagaggtggaccgcaagaat
ggcgccccggcacacctgcccaagatcggggatatcaagaagggctcgcgctactccatt
cctgacctggcggtggatgttgagcaggtgatgggcctggagaaggccagcaagaaggcc
aaagccaacacggtggggggaaggaacaagctcaagaagatctttgacaagacgctcacc
agcatcctgcccccaaaaccatacaacgacgtgggtgtgggccagtcgcaggacgacagc
atcgtgggcctgaagcagtccaaacagattccggccgcgctgccagtcagcggcagcctg
tcgtccagcaaccctgacctgctgcagtcccaccaccgcatcctggacttcaacaaccag
cctgccccagtcgtgacgaacatgtcagaccaggtgctgcgggtgttcaaggcagaccag
caaagtcgatacatcatgatcggtaaggacaccacggccaaagaggtggtggcccaggcc
atccgggagtttgccctgaccgcagtgcccgaagcctattcgctgtgtgatgtgtccatc
acgccggaaggcgtcattaagcagcgccggctcccggagcagctgtccaagctggcagac
aggatacagctcagtggcagatactacctgaagagcaacatggagacagagaccctctgt
tcagacgaggacgcccaggacctccttcgtgaaggccagatctccctcctccagctgtcc
accatggaagtagccacgcagctgtccatgcgcgccttcgaactcttctgcgccatcgag
cccaccgagtacatcgacgacctgttcaagctcaagtccaagacgggctcgttttgcctc
aagcgcttcgaggagattatcaaccaggagaccttctgggtggcgtcggaggtgacccgg
gagcccaaccagctcaagcgcatgaagacggtcaagcatttcatcaagatagctctccat
tgtagagagtgcaagaacttcaactccatgttctccatcattagtggtctgaacctggcc
ccagtatctagactccggggcacgtgggagaagctgcccagtaagtacgagaagctgttt
ggggacctgcaagacctgtttgatccatccaggaacatggccaagtatcgcaatgtgctc
aacaaccagaacctccagcctcccatcatccccctgttccccgtcatcaagaaggacctc
accttcctgcatgaagggaacgactctaaagtggacggcctggtgaactttgagaagctg
cggatgatcgccaaagagatccgccacgtgggtcgcatggcctccgtcaacatggaccca
gcgcttatgttcagaaccaggaagaagaaatggaggagtttaggttctcttagccagggc
agtgccaacgcggcggtgctagacgtcacccagacgggcgggcacaagaagcgggtgagg
cgcagctccttcctgaacgccaagaagctgtacgaggatgcccagatggcccgccgggtc
aagcagttcctgtccaacctcagcctggagaccaacgaggaggcgctgcagaccctctcg
ctgcagtgtgagccctccatcaacacactgcccaagaatgctggtggcagtaaaaggcct
gacacgtctccggtggtgtccagggctgccagccagcagaggggccagctgcagaagggc
aaccaggccctccaggtgcctgctgtggctctctacccatcacgcaagaaagtacccgtc
aaggacctgccaccattcggaacgagttcccctcagtcgttgaagaagatcctgtcactg
tcagaggaggccagcaagcgtcagactgaggacactgtaacatccaacaacacctcgcag
ctctcctccccgcccacctcaccacagagctcacccaagaagggctaccccagaacagga
gatgcctactcagactcgtgtcacagcgagatctcatcgcgctccagcctggtcagcaac
tcctcctttgacatggcccaggaggagaggagggggctcaggcactccggcggggtggga
gacccccacgctggaggggtgcgtctggagaggagggctacgacagacccggaccagtac
agcctcggttcctactcatccatgcaggactgccggggtctgtatacctgtgccacggtg
ctatctcccagctctgaagagctgacccaggaccaaggggaccgtgtctccctggatgct
gcagacagtggccgcggctcctggacctcgtgctcctcgggctcccacgacaacatccag
accatgcaacagggacgcagctgggagaccctggccttcgggccgggtggtgtggtcagc
gtgggtgtccatcctcccggggggcctgaagcgtttataggggtcccctctggaatgtgg
gcgtctcaggctagagggagctgggcatcggcctcttcttcatcttcctctgcagcgtac
tggggcgaggactcggagggtgacacaggcacgattaaacgccgaggcgggaaagacgtg
aacgctgacccggagacgagtagtatcacgtccatggggtctgacgaggccaagcagcac
gggaggccatcgcccatcaccgccggcaacaagggtcttatcacacgaaaggagagccgg
tatcgcgagccccctcccaccccgccaggctacactgccctgacaatctctgacttcagt
gagggccagacgcagtcgccacccccgcccacggccccatcccactctggccgccgccca
cccgactactccacggccctgcagcgctcgcgcatggtcacccagtcgcctgactcccag
catcaccaccaggcccaacaacacccaggttccggaactacaaagcgccatgggctccac
cgcacccgctcgccagacgaggatgaagagccggaggaggaagagggtgagtccttgtct
cccaaactagtcgctctgaggaagacagtggcacacacaacaccagagacaaccaggccc
tga
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