Oncorhynchus gorbuscha (pink salmon): 123995392
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Entry
123995392 CDS
T07892
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040
Spliceosome
ogo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123995392
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
123995392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
123995392
Spliceosome [BR:
ogo03041
]
Complex B
Other components
Prp19-related factors
123995392
Complex C
123995392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
123995392
NCBI-ProteinID:
XP_046154921
LinkDB
All DBs
Position
LG14:73967585..73984771
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AA seq
537 aa
AA seq
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MSLTSFLPAPTQLSQDQLESEERARAQRSHSTALVSSRREPPPYGYRKSWVPRSLEDFGD
GGAFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYDAIARQGQGKDKVIFSKYTDLL
PKEVLNDDAPELQKPDEEAVKELTEKTRDALMKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKGHGGDKGGEDGEARERDEIRH
DRRKERQHDRNISRAAPDKRSKLQRDQDRDVSELIALGQPNPRASNEAQYDQRLFNQSKG
MDSGFAGGEDEMYNVYDQPFRRGSDMAQNIYRPTKSSDKDMYGDDLDTLMQSSKFVPDRE
FSGTDHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSTSRGSKDYDHDKKRRKE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttacgagctttctacctgcgccgacccagctgtctcaggaccagttggagtca
gaggagagagcccgggcacagaggtcccactccaccgccctggtctcctcccgcagagaa
ccccctccctacggctacaggaagagctgggtgccacgctctctggaggactttggagat
ggcggtgccttccctgagattcacgtggcccagttccctctggagatgggccggaagaaa
aagacatccaatgccctggcagttcaggtggatgctgagggcaagatcaaatacgatgcc
atcgccagacagggacagggcaaggacaaggtgatcttcagtaagtacacagacctgctt
cctaaggaagtgctgaacgatgatgctcctgagctgcagaagcccgacgaggaggctgtc
aaagagctgacagagaagacccgcgatgctctgatgaagcaggtctcacagaagattgct
gcagccatgcctgtgagggcagcagacaaacaggcccctgcacagtacatcaggtacact
ccttcccagcagggtgtggccttcaactccggggccaaacagagggtcatccgtatggtg
gagatgcagaaggaccccatggagcccccacgcttcaagatcaacaagaagattcctcgt
ggtcctccctcccctcctgcaccagtcatgcactctcccagcagaaagatgactgtcaag
gagcaacaggagtggaagattcccccctgtatttcaaactggaagaacgcaaagggttac
accatcccactggacaagcgtctggctgcggacggtagaggactgcagaccgttcacatc
aacgagaactttgccaaactggccgaggcgctctacattgctgaccgaaaggccagagag
gctgtggagatgagagcccaggtggagaagaagatggcccagaaagagaaggagaagaag
gaggagaagctccgagagctggctcagatggcccgagaccgcagggcagggatcaaaggt
cacggaggggacaaaggtggagaggacggtgaggccagagagcgtgacgagatccgtcat
gacaggaggaaagagagacagcacgacaggaacatctccagggctgcccctgataagagg
tcgaagctgcagagagaccaggacagagatgtcagtgagctgatcgctctgggccagccc
aaccctagagcctccaacgaggctcagtatgaccagagactgtttaaccagagcaagggt
atggacagtggttttgcaggtggggaggatgagatgtacaacgtgtacgaccagccgttc
aggagaggcagcgatatggcccagaacatctacaggcccaccaagagctctgacaaggac
atgtatggggacgacctggacacactcatgcagagcagcaagtttgttccggaccgtgag
ttctctggtacggaccacggtcctcgtcgtgacggccctgtccagtttgaggaggatccg
ttcggtctggacaagtttttagaggaggcgaagcaacacggcggctccaagagaccctcc
accagcagaggctccaaggactacgaccacgacaagaaacgcaggaaggagtga
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