Oncorhynchus gorbuscha (pink salmon): 123995630
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Entry
123995630 CDS
T07892
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123995630
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
123995630
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
123995630
NCBI-ProteinID:
XP_046155231
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Position
LG14:complement(18759862..18767872)
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AA seq
955 aa
AA seq
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MVQLSPSPARDASPSPECSEKGRQGSPKTGSPKMGSHGGLSPLQLALGTSIPNYQGYESY
IEDGLICLKHKIRNLEKKKIKLEDYRKRLKHGDSLNQDQIDAVEKYDEVIHNLQFAQELH
KTLGGLTQELLKAQKKALRKEQMAKQEVEKRRLCVVLQVKFLLQTLLQHEHIRKDLLSAR
NPQLKVSELQSLLELAELLGVKRDNNVSLEEQMESAALVYLDLLEGNNKAVAGTTYKVLK
AKLAKLMDCGYFDCVPPPPSKSPKEVEDPMTKKTVSDTASLSTLMMSNKKDVPSREFLNR
HYLPDTDPNGCRDTPVTPNWKAEFQAMKEQEPPDSWDMESDSTQPVIQKPWRGAAVFISK
VPVTTKKENAEPKQRRAKSKRERDATAALRVETPVEVFNSQSSLPKDPILPKDPILRKQQ
LEDLMTKIRGSFSFMQDSLLDGEGSPTISHPRLGRHASGSPSPLVQRESRRSPVDHLPKT
LHSTPLPSKLLPVDDEPNMTNGDGGCLESCDLDLTTEDLAHVIAIDPCLLLSESETACPS
PTAPPPFYCRESSISITLDEKTSARTPISESGKQSPCNGVVPPCTPTPTQGQLFSTPPSR
RTLSMAPSVPFQTMHSVFKVNASLLPTGDFKSDIIPYSDSGNDLCYVTTSTQTPPDFAPL
EDEHLQSVNQSECLVGGGGQIFLSPSQSGGTMGRSDQSYYRGSVRGIARGGKGLAHSYFR
SSGGHRGGSFIPQAHLYGARDTGYQHSYRRGGGNAGQRHNNSGWSDSSQVSSPDREGNYS
LVDSAHGDSLQGVGMDLTPQVTPHAPHTLMHVPMYPLPQHPQPLRVAFTAARTANYTPGT
LDQPITFDQLHSNLGEMFNTNVGRFICPANGTYVFLFHILKLAVNVPLYVNLMRNDEVMV
SAYANDGAPDHETASNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccatccccagcccgggatgcgtctccttcacctgagtgctccgag
aaggggaggcaggggagcccaaagacaggtagccccaagatgggctcccacggtgggctg
agtcctctccagctagcactgggaacctccatccccaactaccagggctacgagagttac
atcgaggacggcctcatctgcctcaagcacaagatccgcaacctggagaaaaagaagatt
aaattggaagactacaggaagcgtttgaaacatggggattcactcaatcaagaccagata
gatgcagtggagaagtatgacgaagtgatccacaacctgcagtttgcccaggagctgcac
aagaccctggggggcctaacacaggaactgctaaaagcccagaagaaggcgttgaggaag
gagcagatggccaagcaggaggtagagaagaggaggctgtgtgtagtgctgcaggttaag
ttcctcctgcagaccctgctgcagcacgagcacatcaggaaggacctcctctctgcccgc
aacccccagctcaaggtttcagagctacaaagcctgcttgagctcgctgaactactgggg
gtgaagagggacaacaatgtgagtttggaggagcagatggagagcgcagccctggtctac
ctggacctgctggaggggaataataaagctgtagccggaaccacctacaaggtcctgaag
gctaagttggcgaagctgatggattgtgggtactttgattgtgtaccgccgcctccgagc
aagagtcccaaggaagtggaggatcccatgaccaagaagactgtgtctgatacagccagc
ctctctaccctaatgatgtcaaacaaaaaagacgtgccaagcagagagtttcttaacaga
cactacctgcctgacacagaccccaatgggtgtcgagacactcccgttactccgaactgg
aaggctgagttccaggccatgaaggaacaggagccaccggactcgtgggatatggagtct
gactccactcagcctgtaatccagaaaccatggagaggggcggctgtgttcatctccaaa
gtgccggttactaccaagaaagaaaatgctgaacccaaacagagaagagcgaagtctaaa
agggagcgggacgccacagctgcacttcgtgtggagacccctgtggaggtgttcaactcc
cagtcttccttgcctaaggaccccatcctgcccaaggaccccatcctgcgcaagcagcag
ctggaggacctaatgaccaagatcagaggctccttcagcttcatgcaggattctcttctg
gatggagaaggatcacccactatcagccatcctagactgggccggcatgcctctggatca
ccctccccactcgtacagagagagtcaaggagaagcccagtggaccatctccccaaaaca
ctgcattccactccattgccttctaaactcctccctgttgatgacgaacccaatatgacc
aatggagacgggggttgtctcgagagctgtgatctggacctgactacagaggacctggct
cacgtcatagccattgatccatgtctgctgctgtctgagagtgagactgcctgcccctct
cctacagctcctcctcccttctactgtagggagtcctccatctccatcaccctggacgag
aagacctctgctcggactcccatctctgaatctgggaagcaatccccctgtaacggggta
gtgcctccttgtaccccaacccccacccaggggcagctgttttctacccctcccagcaga
cgtacactcagcatggccccctctgttcccttccagaccatgcattcggtattcaaggtg
aatgcctccttacttccgactggagactttaaatctgatattatcccgtattcggactcc
ggcaacgacctgtgctatgtcaccaccagcacccagaccccaccggattttgctcccctg
gaggacgaacacctacagtcggtgaaccagtctgaatgtctggtgggtggtggtggacag
atcttcctgtcccctagccaatcaggtggtaccatgggccgttctgaccaatcatactac
agaggatctgttagaggtattgcacgtggtggcaaggggctggcacactcctactttcgc
tcttctggtgggcacagaggaggaagcttcatcccccaggctcacctgtacggcgctcgg
gacactggctaccagcacagctacaggcgcggtggaggcaatgcaggacaaaggcacaat
aatagtggttggagtgactcctcccaggtgagcagcccagaccgggagggcaactactcc
ctggtggactccgcccacggcgactcgctgcagggtgttggcatggacctcaccccccag
gtgacccctcatgccccccacaccctgatgcacgtacccatgtacccactcccccagcat
ccccagcccctccgcgtggccttcacagcagcccgcacagccaactacaccccgggcacc
ctggaccagcccatcacctttgaccagctccacagcaacctgggggagatgttcaacacc
aacgtgggtcgtttcatctgcccagccaacggcacctacgtcttcctcttccacatcctc
aagctggcggtcaacgtgccgctctacgtcaacctgatgcgcaacgacgaggtgatggtg
tctgcgtacgccaacgacggggctccggaccacgagacggccagcaaccactccatcctg
cagctgtaccagggagaccaggtgtggctgcggctgcaccgcggatctatctatggcagc
agctggaagtacagcacattctctggcttcctgctctaccaggactga
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