Oncorhynchus gorbuscha (pink salmon): 123996872
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Entry
123996872 CDS
T07892
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
123996872
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
123996872
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
123996872
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123996872
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123996872
Ubiquitin system [BR:
ogo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123996872
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123996872
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
123996872
NCBI-ProteinID:
XP_046156625
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Position
LG02:9806649..9860339
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AA seq
869 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMLLKRHVKEKATGAAGGAISRRRNGRVFLDLELNRDFNGDEYECEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAASAYKKQESDSWDEEIQVSKHARSLRQQD
NGVRIPPSGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGAGGNGHALDHYKDTNFPLAVK
LDNITADGADIYSFDEEEAVLDPHISEHLQHFGIDMLQMQQNGTENGHLNTDNTESVRPR
VSEWEVIQESGMKLKEVYGSGFTGIKNLGNSCYLGTTMQVLFSIPEFQRAYVGNLQRIYD
YSPLDPTTDFSTQMAKLGHGLLSGLYSKPPMKSELIEQVMREEYKHQSKGISPKMFKAMV
SKGHPEFSSNRQQDAHEFFLHLINLVERNSAGSENPSDVFRYLVEERVQCCQTQKVCYNQ
KVDYLMQLPAPMEAASNREELIAYEAKRREAEENMRAPPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGVDWVPKKLDLSIDVPDFLDLSR
LRGTGLQAGEEELPDLTPPIVLPEDTRDDSMNSSDSPDIDESAAMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLALPSFMEPGPSMASLGLAATPLDNQPPEESI
AILTSMGFPRRHTVQALKATNNNLERALDWIFTHPEREEEEEEPSDDLLDMSDIMEPNNN
TFSNANTNSHSTLSPDQDASGPRIKDGPGRYELFAFISHMGASTMSGRYVCHIKKEGRWV
IFNDHKVCLSEKPPKDLGYIYFYRRLSSC
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagatttaggagagctgcttgtcccttatatgcccaccatcagagttcccaga
acaggagacagggttttcaagagcgaatgtgccttttcctacgattctcccgagtctgag
ggaggcttgtatgtgtgtatgaacacattcctgggctttggcagagaacatgtggagaga
cattaccgtaaaaccggacagagtgtttacatgctcctcaaacggcatgtcaaagagaaa
gccacaggtgccgcaggaggcgccatctccagaagaagaaatggcagagtgttcctagat
ttagaactgaaccgtgattttaacggggatgagtatgagtgtgaagacgaggccaagctc
gtcatattcccagaccacttcgagatccccttaccaaatattgaggagttgcctgcactg
gtgacaatagcctgtgatgccgtgctcaacgctgcgtcagcctacaaaaagcaggagtct
gactcctgggacgaggagatccaggtgtccaaacacgccaggagtctccgacagcaggac
aacggagtgaggatcccacccagtggttggaaatgtcagaagtgtgagatgagagagaac
ctgtggctgaacctgacggacggagcggtgctttgtgggaagtggttcttcgacggtgct
ggaggaaacggccacgccctggaccactacaaagacaccaacttccctctggcagtcaaa
ctggacaacatcaccgcagatggagcagatatatattcatttgatgaagaagaagcagtc
ctggaccctcacatatccgaacacttgcaacattttggaatagacatgctacagatgcag
cagaatggaacagaaaatggccacctcaacacagacaacacagagagcgttcggcctcgg
gtcagcgagtgggaggtgatccaggagtcgggcatgaagctgaaggaggtgtacggctca
ggtttcacgggtattaagaacctgggtaacagctgctacctgggcaccaccatgcaggtc
cttttcagcatcccagagttccagagggcgtatgttggaaatctacagaggatctatgac
tactcacctcttgaccccaccacggatttcagcacacaaatggctaaactgggccacgga
cttctctcaggcctgtactccaaaccaccaatgaaatccgagctcattgaacaggtgatg
agagaagaatacaagcaccagtcgaagggcatctctcccaagatgttcaaagccatggtc
agcaagggccaccccgagttctcctccaacagacagcaagacgcacacgagttcttcctg
cacctcatcaacctggtcgagagaaacagtgctggctcagagaaccccagtgatgtcttc
cgctacctggtggaggagcgtgtgcagtgctgccagacgcagaaggtgtgctacaatcag
aaggtggactacctgatgcagctccctgcccctatggaggctgcctccaacagagaggag
ttgatagcgtatgaggccaagcgaagagaggcagaggagaacatgagagcccctccagag
cctgtgagggcccggatccccttcacagcgtgcctgcaggccttcacagagccagagaac
gtccccgacttctggagctcagcactgcaggccaagtcagctggagtcaagacttcccgt
ttcgcctccttcccagagtatctggtagtgcagattaagaaattcacatttggggttgac
tgggttccaaagaaattagatctgtccatagacgtaccagacttcctggacctgtctcga
ctccggggcacagggctgcaggcaggagaggaagagctccctgacctcaccccccccatc
gtcctgcctgaagacaccagagatgactcaatgaactcctcagattccccagatatagac
gagtcggcggcgatgcagctggcggagatgggcttccctctggaggcctgtcggaaggcc
gtttactacacagggaacatgggccctgaaatggccttcaactggatcatagcccacatg
gaggagcctgactttgctgagcccctggcccttccttccttcatggagccaggcccctcc
atggccagcctgggcctggcagccacccccctggacaaccagcctccggaggagagcatc
gccatcctcacgtccatgggcttcccccgccgccacacagtccaagccctcaaagccacg
aacaacaacttggagagggctctggactggatcttcacccacccggagagggaggaggag
gaggaggagcctagtgacgaccttttggacatgtctgacatcatggagcccaacaacaac
accttctccaacgcaaacacgaacagccactccacgctgtccccagaccaggatgcctcg
ggcccccggatcaaagacggacccggacgttacgagctttttgctttcatcagccacatg
ggagcgtccactatgtctggtcgttatgtatgtcatatcaagaaggaaggaagatgggtg
atcttcaatgaccataaagtgtgtttgtcagaaaagcctccaaaagacttgggctacatc
tacttttaccgtcggctgtctagctgctag
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