Oncorhynchus gorbuscha (pink salmon): 123999114
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Entry
123999114 CDS
T07892
Symbol
si:ch73-63e15.2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
123999114 (si:ch73-63e15.2)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
123999114 (si:ch73-63e15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-GeneID:
123999114
NCBI-ProteinID:
XP_046160490
LinkDB
All DBs
Position
LG02:complement(21327224..21427572)
Genome browser
AA seq
1630 aa
AA seq
DB search
MPSLPSPSPAMDGENYLHPEGPQLDSSIFEVASSNMESYLYPSGSWASFSQQSGGYNAHC
PMQSGNQQYHLNAPMPDLDMFSHSGFHDDFLNLPRNGDFPQNLSCIDDLSNSLFSSPADS
LSDYTDAQAFITTDNLAHVPTIWDINTPAQSQLELNANRFQDLNSLEDIAAIISTPPLGG
YQQTQRNQTPAEEEAEEEEEETEELGHVDTYADYKPSKSTIGISHPDIVVETNTLSSVPP
PDISYTLSIPDSTINCGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGRTV
AGIILENYLKGRKKALWFSVSNDLKYDAERDLKDIDAPTIPVHALNKIKYGDTATSEGVL
FATYSALIGESQAGGQHRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAVLDLQ
HNLPLARVVYASATGASEPKNMIYMSRLGIWGEGTPFKTFDDFLHAIEKRGVGAMEIVAM
DMKVSGMYIARQLSFSGVSFRIEEIGLDDDFKLVYNKAAKLWAEALAVFMRAADALCLVS
RKSLWGQFWSSHQRFFKYLCIAAKVRCLVELAKKELKAGKCIVIGLQSTGEARTREVLDE
NDGHLDRFVSAAEGVFKALVQKHFPSEKQRREKARGNKRKRKPRGRQPKFPKHTMVHLGG
VINISDDSSTDTDGMDTDSNSSPDSLMDNNDDVIFVQHTSCHTASIEKMKQSLLNKIADL
GKELPLNTLDELIDQFGGPEMVSEMTGRKGRVVRRPDGSVRYESRAEQSHTIDHINLKEK
DRFMCGEKMVAIISEAASSGISLQADKRVKNQRRRVHITLELPWSADRAIQQFGRTHRSN
QVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKA
LDKITKAILGHIESKVSPPKGYPGGDALFFRDMKHGMMDVGIFCKEPRFGLSTEKDCSIT
KFLNRILGLEVHKQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDEIYEEKQETF
MTVGNPQDGQVVLYKISVDRGMPWEEAYEKVQNLNSPDEGFYLSHKLRGNHPCVLLAEQG
RGRNFIVYKPNIGKQAHPESLDNLQLRYRKVTPDQAKDSWESQFNFSFGKCSHANWNGKC
KKIEEGQECLQGMRLRQYHMLCGALLRVWKYVADVVSDITCSSILQIVRLKTKNSNKQVG
IKIPENCVARVRQELLKMDEEVKRRRKDKEQQRAQEQQRAQEQRLAEERQLQNQHLLAKL
YSQRQTLNHSFNNQNLSQGLKTQHLSLAQANPLQVKPLLQPKPSQLKPQLGPVNQLPSMA
SPTSHFSNFPHHFPSLHLLQPNPSSSSMPPRTREEVLDLTVSPSPSPDSKERGLVLDCLT
RDGFGLDSLILLSELAAQNTAHKLQQPLQPLPSLTKPQQLLSPQQIQPQLQSPQQIHPQL
QSPQQIHPQLQSPQQIQTQLQSPQQIQLQSPQQIQPQLQLPQQIQPQLQSPQQIQPQLQS
PQQIQPQQRLDSPTLINSDHQDYYDILKLLEDPDHLPYSLSSQTTTNPSTSSNTVAQVSS
GLLSSPSTPSSSLFSPSALAPSEQQPLPLANGHCSTDALINVREVLDNMLRTSADRQTVI
HYRLPEWDSV
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcctcccatcaccctcaccggccatggacggggagaactacctgcacccagag
gggccacagctggacagcagcattttcgaagttgcctcttccaatatggagagttatctg
tatccctctggttcctgggcatcattttcacagcagtctggaggctacaacgcacactgc
cctatgcaatctggaaaccagcaataccacttgaatgctcccatgcccgatttggacatg
ttcagccattcagggttccatgacgatttcctcaacctccccaggaacggagacttccct
cagaacctgtcctgcatcgatgacctctccaactctctgttctcctctccggccgactcg
ctgtcagactacaccgatgcccaggccttcatcaccacagataacctggcccacgtgccc
acgatatgggacataaacacaccagcacagagccagctggagctgaatgccaacaggttt
caggatttgaacagtttggaggatatcgctgccattatcagcaccccacctttgggagga
taccagcagactcagagaaaccagactccggcagaagaggaggcagaggaggaggaggaa
gagacagaggagctgggacatgtagacacctacgctgactacaaaccatccaaatccacc
atagggatctcccacccagacatagtggtggagaccaacacgctgtccagcgtccctcca
cctgacatctcctacactctgtccattcctgactccaccatcaactgtggcctgctctct
gccctgcagctggaggccatcatatacgcatgccagcaacacgaggtaattctgcagaac
aaccagagagcaggcttcctgataggagacggggccggagtagggaaaggccgcacagtg
gctggcatcatcctggagaattacctaaagggaaggaagaaagcgctatggtttagtgta
tccaatgacctgaaatacgacgcagagagagatctgaaagacatagatgctcccaccatt
cctgtgcatgccttaaacaagataaagtatggagacacagctacctcagaaggagtcctg
tttgcgacatactctgcactgatcggggagagccaagcaggtgggcagcaccgcaccaga
ctcaagcagatcctggactggtgcaagcccggctttgatggagttattgtgtttgacgaa
tgccacaaggccaagaatgctacgtccaccaagatgggcaaggccgtgctggacctgcag
cacaacctgccgctggcaagggtggtttacgccagtgccacaggtgcctctgagccaaag
aacatgatctatatgagccgcctggggatctggggcgagggtacgcccttcaagaccttt
gacgacttcctgcacgccatcgagaagaggggtgtaggcgcgatggagattgttgccatg
gacatgaaggtgagtgggatgtacatcgccaggcagctgagcttctcaggggtgtccttc
cgcattgaggagatcggtctggacgacgacttcaaactggtctacaacaaagctgccaaa
ctgtgggcggaggcgctggccgtgttcatgcgtgcagcggacgcgctgtgtctggtcagc
aggaagtccctgtggggtcagttctggtcttcccaccagcgcttcttcaaatacctctgc
atcgccgccaaggttcgctgcctggtggagctggccaagaaagaactgaaagctggcaag
tgcatcgtgattggtctacagtccacaggagaggcccgaaccagagaggtcctggatgag
aacgatgggcacttggacagattcgtatctgcagcagagggtgtgttcaaagctctggta
cagaaacactttccctccgagaagcagaggagagagaaggcacgtggaaacaagagaaaa
cgtaagcccaggggccggcagcccaaattcccaaagcacaccatggttcatctggggggc
gtgatcaacatcagtgacgacagcagcacggacacggacggcatggacaccgactccaac
tcctcgccagactccctgatggacaataacgatgacgtcatcttcgtccagcacaccagc
tgtcacacagccagtatagagaagatgaagcagagcctcctgaacaagatcgctgacctg
ggaaaggaactacctctgaacactctggatgagctcatagaccagtttggaggaccagag
atggtatcggagatgacgggtcgtaagggtcgcgtggtgcgacgtcctgacggaagcgtg
cgctacgagtcgcgtgcagagcagagccataccatagaccacatcaacctcaaggagaag
gaccgcttcatgtgtggagagaagatggtggccatcatctcagaggcagccagctcgggc
atttccttgcaggcagacaagcgggtgaagaaccagcgtcggagggttcacataacccta
gagctgccctggagtgcagacagagccatccagcagtttggtcgtacccatcgctctaac
caggtgacggctccagagtacatcttcctcatctctgagctggccggggaaagacgcttt
gcctccattgtggccaagagactggagagcctgggtgcattgacccacggtgacaggaga
gccacagagtccagagacctgagcaaatacaactttgaaaacaagtacggtaccaaggct
ctggataagatcaccaaagccatcctgggccacatcgagagcaaggtgtcccctcccaaa
ggttaccccgggggtgatgctctgttcttcagagacatgaagcatggcatgatggacgtg
ggtatcttctgcaaggagccacggtttggtctcagcactgagaaagactgcagcatcacc
aagttcctcaacaggatcctgggcctggaggtccacaagcagaactctctgttccagtac
ttcaccgacaactttgactacctgatcgagaaggacaaaaaggagggcaaatacgacatg
ggaatcctagatctggccccaggtaacgatgaaatctacgaggagaagcaagagaccttc
atgacagtgggaaacccccaggacggacaggtcgtgctctacaagatcagcgtggacaga
ggtatgccctgggaggaggcctatgagaaggtccagaacctcaacagtcctgacgagggc
ttctacctctcacacaagttgcgggggaaccacccgtgtgtgctgctggcggagcagggc
cgagggaggaacttcatcgtctacaagcccaacatcgggaagcaggcccacccagagagc
ctggacaacctgcagctacgctaccgcaaggtgactccagaccaagccaaggacagctgg
gagagccagttcaacttctcctttgggaaatgtagccatgctaactggaatgggaagtgt
aagaagatcgaggagggtcaggagtgtctgcaaggaatgcgtctgcgccagtaccacatg
ctgtgtggtgcgctactgcgcgtctggaagtatgtggctgacgtggtctctgacatcacc
tgctccagcatccttcagatcgtacgcctcaaaaccaaaaatagtaacaagcaagtcggt
atcaagatcccagagaactgtgtggcccgagtgcggcaggaacttctcaaaatggacgag
gaggtgaagagaaggcgcaaggataaggagcagcagcgcgcccaggagcagcagcgcgcc
caggagcagcggctagccgaggagcggcagcttcagaaccaacacctgctggccaagctt
tacagccagagacagaccctgaaccacagcttcaacaaccagaacttgtcgcagggcctc
aagacccagcacctgagcctggcccaggccaatcctctacaggtcaagcctctactccag
cccaaaccttcacagctcaaaccccagctcggtccagtcaaccagctccccagcatggcc
agccccacctcccacttctccaatttcccccaccacttcccctccctgcacctcctgcag
cccaacccctcctcctcctccatgcctcctcggaccagggaggaggtcttagacctgacg
gtgagcccctctccctccccagacagcaaagagagaggcctagtcctcgactgcctgacc
agagacggctttggcctggactctctgatattgctgagcgagctagcagcccagaacact
gcacacaaactgcagcaacctctacagccactgccatcactgacaaagccacagcagcta
ctgtcgccacagcagatacaaccacagctacagtcgccacagcagatacatccacagcta
cagtcgccacagcagatacacccacagctacagtcaccacagcagatacaaacacagcta
cagtcgccacagcagatacaactacagtcgccacagcagatacaaccacagctacagttg
ccacagcagatacaaccacagctgcagtcgccacagcagatacaaccacagctgcagtca
ccacagcagatacaaccacagcaacggttggacagtccgactctaatcaacagcgaccac
caggactactatgacatcctcaaactgctggaagatccagaccatctgccttactctctg
tctagccagacaactactaacccctccacttcctccaacacagtggctcaagtctcgtcc
ggcctcctctcttccccctctaccccctcctcctctctcttctctccttcggccctggcc
ccctcagaacagcaaccgctccctctggccaacggccactgcagcacggacgccctcatt
aatgtgcgcgaagtgctggacaacatgctgcggaccagcgcagaccggcagacggttatc
cattaccgactgcctgaatgggactctgtgtaa
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integrated database retrieval system
