Oncorhynchus gorbuscha (pink salmon): 123999777
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Entry
123999777 CDS
T07892
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like
KO
K14316
nuclear pore complex protein Nup121
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123999777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123999777
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123999777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
123999777
NCBI-ProteinID:
XP_046161759
LinkDB
All DBs
Position
LG16:57627265..57640562
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AA seq
1225 aa
AA seq
DB search
MSSREKRLIALISLVVCATAIFCLVLYYIPTLLYIAFIIVVCCVACYYQSGESLYVRLGP
HPRRGLTIPPVLRRCLPGIANGVPTAGRVRSRTVKDVRESVFTGQRRFDSAICRKDATHS
DSFILSPRDILMGSYIGKAKSPASVVGRPRAGASSGANTIAREQLTLHERLARPNQAVIT
PNRRLSFGGEPLGTVGRFTITPQRHYPLQQTGTSVGILPPTQWDGFRKKNILTPRNSPAV
HSPVTVKIARPDHNTTQSQLFDHLNSPGVLGSPGLGAPADPCSRETVLSVLKESRKRVVE
DDRSFTAGQKSKRRRHDSSGSAHLAFEPLLPNGAPSQLVLNSLKRGLNAMVEESTMKRSR
TSSISSVSCGLTPSGTLGSVRNSIRSSLSSSQGITPWKKASTRSLSPLSSPGSSRSQTPE
RASKKPREEDARSPSSVSLARSDKTLTDPAPTTGKLSPAPEVPVASASSDSAGSGKRKRK
IPLVSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLKEPEPEKPAPVVTTSS
KPPVSDNPTPTLLASHLTVSMPARVAAPIPVINLDPVPSNTVNTAPTSTSFPVTNTPAAN
PLLESLKMMRNNPLTSAAADNPTAVTNPAPLVPAEQKSKTSLTAPQATLPSLSQPALPSL
SQPALPSLSQPALPSLSQPALPSSQPALAPPSLSQPAPPSLSQPAPPSLSQPAPPSLSQP
APPSLSQPAPPSRSQPAPPSRSQPASTMPSAFTQALSQVTKAPSSVPILGGASLFGMANP
LTAPSSSLGPTTTTETTSSNNPLQASVFKPIFGATALAPEGTPALPTFKPIFGSATATSA
FGQPASTSAPSNASTSAIVFSRLTNSSTVAPATSLFTGLSNSTNPATPPSVKSLFGSWSA
LPATTAATTTATGSTFQFGTASTTAPGPTLSSTAAATTSNSGFSFGAMTTTSATTQPTPS
ATTQGGFTFGQPVATQSSTTASFGGFGMATAATATAPAPANQSTFTFGKSSFEAPAASVF
PGAIQAPAATAAANPFTFGSPATGATPAPFAFGAAATTATSTFGATTKLAFGANSTGFAF
GNTTGTPAAPAFGSATQTVGILPASAPTFSFGGVSTQQAPATPAQPATGGFNFGAAISGT
QFGTSNPTTQTPGFNFGTSTPAFGQSTAAGPVPFGSPGTPVQGFSAMGSSSFGSPSAPSF
SIGAGSKTSGARQRLQARRQHPRKK
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagagagaagcggttaatagcgcttatctctctcgtggtctgtgctaccgca
atattctgtctagttctgtattatattccaacgttgctttacatagctttcattattgta
gtttgttgcgttgcctgttattatcagagcggagaatctctttacgttagattaggccct
catccacgccgtggtctgacaattccacccgtgctgcgacgctgtttgccagggattgca
aacggagtacccacagcgggaagagttagaagtcgcacggtcaaggatgttagggaatca
gtatttactggccaacgacgtttcgatagcgctatttgtcggaaagacgcgacacacagt
gactcatttattctcagtcctcgggatatactcatgggaagttacattgggaaggcaaaa
agtcctgcctcagttgtggggaggccgcgagcgggtgcaagttcgggtgctaacaccatc
gcacgagaacagttaactttacacgaaagattggcgcgacccaaccaggctgtcattact
ccaaacagacgactgtcattcgggggtgagccccttggcactgtgggcaggttcaccatc
actccccagcgccactaccccctccagcagacgggcacctctgtgggcatcctgcccccg
acccagtgggacggcttcagaaagaagaatattctcacccctcgcaactctccggcagtc
cacagtccagtcacagtgaagatcgctaggccagatcacaacaccactcaatcccagtta
tttgatcatttgaactccccgggagtccttggctctccaggcctgggggcccctgcagac
ccctgctccagggagactgttctgagcgtgctcaaagagagtcgcaaaagagtggtggaa
gatgacaggagcttcactgcagggcaaaagagcaaaaggaggcgccatgacagcagtggg
agtgctcacttggcatttgagccactactgcccaatggagctccatcacagctggtgctg
aattctctgaagcgggggctgaatgctatggtggaagagtcaacaatgaagaggtcacgc
acctcctccatcagctctgtgagctgtggcctgacccccagcggcaccctgggctcggtc
cgcaactccatccgtagctccctcagctcctcacaaggcattactccgtggaaaaaagcc
tccacccgcagtctctccccgctctccagccctgggtcgtcccggtcccagaccccagag
agagcctctaaaaagcctagggaagaggacgctcgctcacccagctccgtgtccttggcg
aggtctgacaagacgttgacagacccagcaccaaccactgggaagctgtctccagcccct
gaagtccctgtggcttcagcctcgtcagactctgccggtagtgggaaacggaaacgtaag
attccgctggtgtccagccgtagaggagaccaaatctctttgcctccacctcctgagttg
ggctacaccatcacggtgaaagacctggatcaggagaagaaagccgctctcagccagatc
aacacagtcctcaaagagcctgagccagagaagcctgctccggtagtgaccacatcttct
aagcctcccgtgtcagacaaccccacacccaccctgctggccagccatcttaccgtttca
atgcctgctcgtgtggcggctcctatccctgtcatcaacctagaccccgtcccctcaaat
accgtcaacacggccccaacctccacctccttccctgtcaccaacacccctgcagccaac
cccctcctggagtctctgaaaatgatgaggaacaaccccctcaccagtgctgctgctgac
aatcctacagcagtgacgaaccctgcaccactggtgcctgcagagcagaagtcgaagacc
agcttgactgctcctcaggccaccctaccctccctctcccagcctgcactaccctccctc
tctcagcctgcactaccctccctctctcagcctgcactaccctccctctctcagcctgca
ctaccctcctctcagcctgcactcgcaccaccctccctctcccagcctgcaccaccctcc
ctctcccagcctgcaccaccctccctctcccagcctgcaccaccctccctctcccagcct
gcaccaccctccctctcccagcctgcaccaccctcccgctcccagcctgcaccaccctcc
cgctcccagcctgccagcaccatgccctctgccttcacccaggcgctgagccaagttacc
aaggcccccagcagtgtccccatcctgggtggagcgagcctgtttggaatggccaatcca
ctgactgccccgtcctcatcactgggccccaccaccaccacagaaacaaccagtagtaat
aatcccctccaggcctctgtgttcaagcccatcttcggggccacggccttagccccagag
ggcacacctgctcttcccacctttaaacccatatttggaagtgccacagccaccagtgct
ttcggacagccagcctccacctcagccccctccaatgccagtacgtctgccatagtgttc
agcaggctaaccaacagcagtacagtggccccagccacctccctgttcactgggctgtct
aatagcaccaacccagccaccccgccatctgttaagtctctgtttggaagctggagtgcg
ctacctgcaacgactgctgccacaaccactgccacaggaagtaccttccagttcggcacc
gcctccaccacagctcctggacccactctcagctccactgcagccgccaccactagcaac
agcggcttttcgtttggtgcgatgaccaccacctctgccaccactcaacccaccccctca
gctaccacccaggggggattcacctttggccagcctgtagccacccagagctctaccact
gcatccttcggtggctttggcatggccactgcagccactgctactgctcctgcacctgca
aaccagtccactttcacatttgggaagtcgtcgttcgaagctccggcagcatcggtgttc
cccggtgcgattcaggccccggctgctactgcggcagctaatcctttcacatttgggtca
cctgccactggggccacccctgccccttttgcttttggtgctgctgccactacggcaacc
tctacctttggggccaccactaagctggcatttggagccaactccacaggttttgcattt
ggcaacaccaccggcaccccagcagcccctgcatttggctctgccacccagactgtcggc
atactcccagcctccgccccaactttctcgtttggtggtgtgtccacacagcaggcccct
gctacccctgcccagcctgccaccggaggattcaacttcggcgcagccatttcaggcact
cagtttggaacctctaaccccacaacacagacaccaggcttcaactttgggacgtctacc
cctgcttttggccagagcacagctgcaggtcctgtcccctttggaagcccaggaactcca
gtccaaggattcagtgctatgggatcctcatcatttggctctccatcagctccttcgttc
tccattggcgctggctccaaaacatcaggggcgcgccagaggctacaggcccgaaggcag
caccccaggaagaagtag
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