Oncorhynchus gorbuscha (pink salmon): 123999778
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Entry
123999778 CDS
T07892
Name
(RefSeq) single-minded homolog 2-like
KO
K09100
single-minded
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123999778
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
123999778
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
SIM_C
HLH
PAS_9
A_deaminase_N
PAS_4
Motif
Other DBs
NCBI-GeneID:
123999778
NCBI-ProteinID:
XP_046161760
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All DBs
Position
LG16:57778986..57808863
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AA seq
803 aa
AA seq
DB search
MKEKSKNAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPDGL
GEAWGQPTRISPLDNMAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELT
GNSIFEYIHQSDHDEMTAVLSAHQPLHHHFLQEYEIERSFFLRMKCVLAKRNAGLTCGGY
KVIHCSGYLKIRQYVMDMALFDSCYQIVGLVAVGHSLPPSGITEIKLHSNMFMFRASLDL
KLIFLDSRVAELTGHEPQDLIEKTLYHHVHGCDAFHLRFAHHLLLVKGQVTTKYYRMLSK
HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDVEYKDMQLSQEQSRAAKSSLVFKSGP
ASSQDPRKQHKAKAVKIKSKLKTAPYPQPNITYHPDKLDCSPQGEAWKESPPYTLTPCQG
QSSGPSGGPEAEEVLFSISAPYGLSFPNPYGHLPHTDSQRRVRPTQGSSSASPSPASPSL
AARQLLSSLQDRGGEERWSCANAKSHPGHAPRRSVASCAITTATAAAYSGPTASRGYPPS
EPLHGVLSSCATLRPISRYKEEPYEHHTLGQRKNTEDRLPSQSQATKEDSKLPFNRDHLH
KISEGGGCIVGEKPLSCPLLSSSVLEKASYKQSGSLHGLGQPFPMQVVLEQHRRLCMMES
PYSHSATGPLEHTDSNWERRTPKLLEPEAGERRMWMGVGVEVGVGMGVGVEVGVGMGVGV
GAGLPAQAPYMSLNLHHVLAKHSSFQAPPYAALGHLSDSYGYRGDEMGSYGYKSQSPASG
SSPETHREIPHYIGTSVIITNER
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaagtccaagaatgcggcgaagacgagacgagagaaagaaaatggagaattt
tatgaactggcgaaattactgcctttaccttcagccatcacctcacaactggataaggct
tcaataattcggctgacaaccagttacttgaagatgagagccgtgtttccggatgggctg
ggggaggcctggggccagcctaccagaatcagccctctggacaacatggcaaaagaactg
ggatcccatctactgcagactctggacggcttcgtattcgttgtcgcttcagacggcaaa
atcatgtacatctctgagactgcatcagtccacctcggcctatcccaggtggagctgacg
ggcaacagtatatttgagtacatccaccaatcagaccatgatgagatgacggccgtgctc
agcgcccatcagcccctccaccatcacttcctgcaagagtacgaaattgagcgctctttt
ttcctgaggatgaagtgtgtattggccaagcgtaatgcaggactgacatgtggaggatat
aaggtgatccactgcagtgggtatttgaagatccgtcagtacgtgatggacatggcactg
tttgactcgtgttatcagatcgtgggtctggtggcggtgggccactccctgcctcccagt
ggtatcacagagatcaagctccatagtaacatgttcatgttcagggccagcctggacctc
aagctcatcttcctggactctagggtggctgagttgacgggacacgaaccccaggacctg
atcgagaagacactataccaccacgtgcacggctgtgacgcattccatctacgcttcgct
caccacctcttgttggtgaaagggcaggtcaccactaagtactaccgtatgttgtccaag
cacgggggctgggtgtgggtgcagagctacgccaccatcgtccacaacagccgctcctcc
agaccccactgcatcgtcagtgtcaactatgttctcacggacgtagaatataaagatatg
cagctgtctcaggagcagagtcgagcggccaaatccagcttggtctttaagagtggcccg
gcctcctctcaggacccccgcaaacaacataaggccaaagcagtcaagatcaagagcaaa
ctcaaaacagccccctaccctcagcccaacatcacctaccatccagacaagctggactgc
tccccccaaggagaggcctggaaggagagccccccgtacaccctgaccccctgccagggg
cagagctctggcccctctggaggcccagaagctgaagaggtcctgtttagcatcagcgcc
ccgtatgggctctccttccccaacccatatgggcacctaccccacacggactcccagagg
agggtgcgacccacccagggttcctcttccgcctcgccctccccggcttcccccagcctg
gccgcccggcagctgctcagctccctgcaggatcgagggggcgaggagcgctggagctgt
gccaacgccaaaagccatcccggtcacgccccgaggcgctctgttgcatcgtgtgccatc
accactgccactgcagcagcgtattccggccctacagcgagcagggggtacccccccagc
gaacccctccatggcgtcctctccagctgtgcgaccctgcgccctatcagcaggtacaag
gaagagccctacgagcatcacacacttggccagaggaagaacacagaggaccgcctgccc
tcccagtcacaggccacgaaagaggacagcaagctgccgttcaaccgagaccacctccac
aagatctcagagggaggtggttgcatagtaggggagaagcctttgtcctgtcctctgctg
agtagctctgtgctggagaaggcgagctataagcagtccgggtctctccatggcctgggc
cagcccttccccatgcaggtggtgctggagcagcacaggaggctgtgtatgatggagtcc
ccctacagccacagtgccactggccccttggagcacacggacagcaattgggagcggagg
acccccaagctgctggagcctgaggcgggggagaggaggatgtggatgggggttggagtt
gaagttggggttgggatgggggtgggagttgaagttggggttgggatgggggtgggagtt
ggggcaggcctgccggcccaggctccgtacatgtctttgaacctccaccacgtcttggcc
aaacacagctccttccaggccccgccctatgctgccctcggccatttgtcggacagctac
ggttaccgtggtgatgaaatgggttcttatggctataagagccaaagccccgcctctggc
tcctcccctgagacccacagggagatccctcattacatcggcacgtccgtcatcatcacc
aacgagaggtga
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