Oncorhynchus gorbuscha (pink salmon): 124002881
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Entry
124002881 CDS
T07892
Name
(RefSeq) PR domain zinc finger protein 2-like isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00310
Lysine degradation
ogo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124002881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124002881
03036 Chromosome and associated proteins [BR:
ogo03036
]
124002881
Enzymes [BR:
ogo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
124002881
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
124002881
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124002881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-C2HE
zf-C2HC_2
zf-C2H2_11
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
124002881
NCBI-ProteinID:
XP_046166635
LinkDB
All DBs
Position
LG18:65203055..65212731
Genome browser
AA seq
1585 aa
AA seq
DB search
MSVLGINKARKLLERARQACLGGFRGPKQTGGTKPIVTEMWDTEEGPNEEDERPSPSQGT
RESSTMGSNSLSQAQFISAAMREKDEGDEEDPRDLRPSQSALSATEAESEDRCEQPDLPL
SHSSPGEVGPGSLQTASSLPRPEPEADPYLDPDLEGDPHGEESHPCQHCERHFSTKQGLE
RHTHIHATANQQTHTFKCRYCGKSFGSQVGRRRHERRHENGPKNKGQRPGSLAGTATLLS
PLGQADCSSPDCATVSGHYIVMGSPLPGGLMQSPQLVRKDPVAESDQPFIVDENGETKEL
HPCKYCNKAFGTHTNMRRHQRRIHERHLLPKGVRRKGMLLQESPQQQQQQQRLPEQSPSA
SPPPVYVPSADTEDEGDREEYMVDISNNISENLSLYIDGKILSTSSVSGCEVIEVDSSSA
ALFGLDAVVISPNQISQAFKVDTRTCAVKQVSNLGQPTTKRRTSTPPLMPSLKMESENGS
SASSSSTSSSSTLLVESLFPQSSDSLAFQKEKTIYLSPKLKQLLQTQTDGQKPTIALIAD
SHRLAPPLSVTSLPAASGRFKRRTASPPSSPQLSPALKADGCKSEAGVSSYTLKVPKLES
LGISSAWSLSSKEERNTMSPSGKDGCSWSASRTGGNSCNQQPLDLSSGISKWSDSFNKTP
REEVLDLSMSRKSTAEPESKGSPAPTQPHTKKKKPNTSMLEKVLMNEYAGLNPAGEEGSC
ALGSPDSQYTASSGTGTGSHSPSSNMPFESADPSPPSLTPVTMNPSSPCVSSLTSPTPPP
PVLPSMPSSDCPTSSSLPVLSPKMSPRSIDHCEDEPVCVSNSTTAETILAAVSNSYGDVT
KPVDPTHNTDPVIGKALSNPSTESPSVSDAVPVSLSSAQSKPARSGNHIFLDIQINPDLE
PIITEGQGKSQCSELPVLSPVTESPLTASSTSPVGISDVPAPSVVSPASLSSTVIKEEVQ
HMDQLADLGLPPGATGSSPPSAAAAEKPSEEVVEEEGLEPDPFSKSFVCNVCEDPFRSIK
ELSRHIVEHAAEWPYRCEFCVQLFGNAPALLEHRTALHGVGRIFVCSFCSKEFAFLCNLQ
QHHKDLHPSQPCTHAAVESGKLRPQNYTDPARAKEESNLSTTGPESSAEAASSQGVSDVK
KEQPDTNGKHEEAGPEDPTEELYTTIKIMASEGGKPKGPDVRLGINQHYPSFKPPPFPYH
NRTAADSVASATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTP
KKNPIPLRQIVKPQNGALSPASAANAGHNAFRRMGQPKRLNFNQEPLGKTKMSSLSKKKN
QLVQKAITQRNKTAATAKAPSQVKEEEPQGVHVCPHCSREFTYPASLSKHIAVSCPMKPD
SKKAKKGAAAEEATPAVDKNMSLRRRTTDSEIQQPETAEPVPKTLGKTRARTSGPGSAEA
ETTPRPGKGKTAVTQVRTKRPASFPAATVSLNMKSKKGKVQSLPPTPLPSETPSNSAPLP
ATQTKQRTGKEMLPKKVAEVKLPLQKQSQVPPKKEGERFSLRARERAGGPVTRSLQMANN
VAPVEVKTENLSSQGPKETQESLLK
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcttggcatcaacaaagccagaaaactgttggaaagagccagacaggcttgt
ttgggtggattccgtgggcccaaacaaacaggcggaaccaaacctattgtcacagagatg
tgggatacagaggaaggtccaaatgaggaggacgagagaccctctccttcacaggggact
cgggagagctccaccatggggagtaacagcctctctcaagcccagttcatctcagcagca
atgagagagaaagatgagggtgatgaggaagacccaagggatctgcggccgtcgcagagt
gctctgtctgctactgaagctgagtcggaggataggtgtgagcagcctgatctgccacta
agccatagcagcccaggtgaggtggggcctgggagccttcagactgcctcatccctacca
aggcctgaaccagaggctgacccatacctcgaccctgaccttgaaggtgacccccacgga
gaggagtcccatccctgccagcactgcgagcgccatttctccaccaaacagggcttggag
cgccacacccacatccatgccactgcaaaccagcaaacgcacacgttcaaatgccgttac
tgtggcaagtcctttggctcgcaggtgggacgtcggcggcacgagcggaggcacgagaac
gggccaaaaaacaaaggccaaaggcctggctcactggctggaactgctactttactcagt
cctctggggcaggctgactgttccagcccagactgtgccactgtctctggccactacatt
gtcatggggtccccgctccctggaggacttatgcagagccctcagcttgtgaggaaggac
cctgtggctgagagtgaccagccctttatcgtggatgagaatggagagacaaaagagctt
catccttgcaagtactgtaataaggctttcggcactcacactaacatgcgcagacaccaa
cgcagaatccacgagcgccacttactgcccaagggtgtgcgcaggaaaggcatgctgctg
caggagagcccgcaacagcaacagcagcagcagcgtctgcctgagcagtcccccagtgcc
agcccaccccctgtctatgtgcccagtgcagacactgaggatgagggggaccgagaggag
tacatggtcgacatatccaataatatctcggagaacctcagcctgtacatcgacggcaag
atcctgtccactagttcagtcagcggctgtgaagtgatcgaagtggactccagttctgca
gcactgtttggtctcgatgcagtggtcatcagccccaatcagatcagtcaggctttcaaa
gtggacaccaggacctgtgctgtgaagcaggtctccaacctcggccagcccacgacgaaa
aggagaacgtcgacacccccgctcatgcccagtcttaaaatggagtctgaaaatgggtcc
tctgcctcttcctcctccacgtcttcctcatctaccttgttggtggaaagtctcttccct
cagtcctcagactcattagcatttcaaaaggagaaaactatctatctgtctcctaagctc
aaacagctcctccagactcagacagacggtcagaaacccaccatcgccctgatagcagac
agccacagattagctccccctctctccgttacgtctttgcctgcagcctcaggcaggttt
aagaggagaacggcttcccctccctcgtctccacagctcagccctgcgctgaaagcagat
ggctgtaagagcgaggcaggggtctcgtcgtacaccctcaaggtgccaaagctggagagc
ctgggcatttcctctgcctggagtctgtccagcaaagaggagaggaacaccatgagtccc
agcgggaaggacgggtgcagctggtctgcctctcggaccggagggaactcgtgtaatcag
cagcccttggacctttccagtggcatcagtaaatggagtgacagcttcaacaagacgccc
agggaggaagtgctggatttaagcatgagtcggaagagtacagcggagccagagtccaag
ggaagtccagctccgacacagccccacaccaagaagaagaagcccaataccagtatgcta
gagaaggtgttgatgaatgagtacgctggcttaaacccagcaggagaggagggctcttgt
gccttgggaagcccagattctcagtatactgcaagcagtggtacaggcacaggttctcac
agtccctcttccaatatgccctttgaatcagccgatccctctcccccctctctaacccct
gtcactatgaatccctcctccccctgcgtctccagcctgacctctccaactccacctccc
cctgtcctaccctctatgccctcatcagactgccccacttccagctctctccctgtcctc
tcccctaaaatgtcccccagatccattgaccattgtgaggatgagccagtttgtgtatct
aactctactacagcagagacaatattagctgcagtaagtaacagttatggagatgttact
aagccagtagaccccacccacaatacagatcccgttatcgggaaagctttatcaaacccc
tctacagagtccccctcagtatctgatgctgtccctgtgagtctgtcctcagcacaatct
aaacctgctaggagtgggaaccacattttcttagatatccaaattaacccagacctggaa
ccgattattactgagggacaggggaaatcccaatgctctgaactccctgttttatcaccc
gtaacagaatcccccctcactgcctcatcgacctctcctgttggaatatcagatgtccca
gctccgtcagtggtatccccagcatcactctctagcactgtgattaaagaggaggtccag
cacatggatcagctggctgatttaggccttcctcctggtgccacagggtcttcacctcca
tctgccgctgctgctgaaaagccctctgaagaggtggtggaggaggagggattggagcca
gaccccttcagtaagagctttgtgtgtaacgtgtgtgaggatcccttccgctccatcaaa
gagctcagtcggcacatcgtggagcacgcggctgagtggccctacaggtgtgagttctgt
gtgcagctgtttgggaatgccccggccctgctggagcaccgtacagccctccatggtgtg
ggacgcatctttgtctgctccttctgctccaaggagttcgccttcctctgcaacctccag
cagcaccacaaagacctgcatcccagccagccgtgcacacacgcagcggtggagagtggc
aagctgaggccacagaactacacagacccagccagggccaaagaggagagtaacctctca
accacagggcctgagtcctctgctgaagctgcctcctcccagggggtctctgatgtgaag
aaagagcagcctgatactaacgggaagcatgaggaggctggaccagaggaccctactgaa
gagctctatactacaataaagatcatggcttctgaaggaggcaagcctaaaggcccagac
gtacgcctgggcattaatcaacactaccccagtttcaagccaccccccttcccctaccac
aaccgcacggctgcagactcagtggcctcggccaccaacttcactacccacaacatcccc
cagacattcagcactgccatccgatgcaccaaatgcggcaagagctttgataacatgccc
gagctgcacaagcacatactagcctgtgccaacgctagtgataagaggcggtacactccc
aagaagaaccccatccctctcagacagatagtgaagcctcagaacggagctctgtcacct
gcctctgctgccaacgcagggcacaacgccttccgcagaatgggccaacccaagaggctg
aacttcaaccaagaaccgcttggcaaaaccaagatgagttccctcagtaagaagaagaac
cagctggttcagaaggccatcactcagaggaataagactgctgctactgctaaggccccg
agccaggttaaagaggaggagccgcagggggtccatgtgtgccctcactgcagtcgggag
ttcacttaccctgccagtctcagtaaacatatagcagtcagctgtcccatgaagcctgac
tcgaaaaaggccaaaaagggagcagcagcagaagaggcaacaccagctgtagataaaaac
atgagccttcgaaggagaaccacagactctgagatccagcagccagagactgctgagccg
gtgcccaaaaccctgggcaaaacacgcgctcgcacttctggacccggctctgcggaggct
gagaccacaccgcggccaggtaaaggaaagactgctgtcacacaggtgcgtacgaagagg
ccagcgtctttccctgctgccacagtttctctcaacatgaaaagtaaaaaaggcaaagtt
caatcattaccccccaccccgttgccctccgagactcccagtaactctgcaccactgcca
gcaacccagacaaagcaacgcacgggcaaggaaatgctgcctaagaaggtagcagaggtg
aaattgcccctacagaagcagtctcaggtgccgcctaagaaagaaggggaacggttctct
ctgagagcgagggagcgagctggtgggccggtgacccggagcctacagatggccaacaat
gtagctcctgtggaggtgaaaacagagaacctctccagccagggacctaaagagacccag
gagtccttgctgaaatga
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integrated database retrieval system
