Oncorhynchus gorbuscha (pink salmon): 124005018
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Entry
124005018 CDS
T07892
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124005018 (rbfox1l)
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124005018 (rbfox1l)
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
124005018
NCBI-ProteinID:
XP_046169804
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All DBs
Position
LG19:4929468..4946782
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AA seq
393 aa
AA seq
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MLSSPTMILQPYGLPVYPQGAQCYPSLVQGGPGQEAGPGSGDPTLPQVYAQPPSYPPPGQ
APPTPAGRLPPLDYSPAHPNSEYQEHHQLRVYQGPQHEGADTLAAISTDNALVPVTSDSQ
ALSVSVSSGGGAGSGSDEEGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFESAMEADRAREKLNGTIVEGRKVEVNNATARIVTKKPQTPLVNGEVS
TPGWKINPVMGAMYAPELYTGEFQFASFPYPVAAPTLAYRGSPLRGRGRAVYNTIRSAAA
VPPTAMPAYPGMSPFSVLYQDGLYGAEVYGGYPAAYRVAQSPSAATATYSDGYGRVYAAA
TDPYHHSVGPTATYGVGTMASLYRGGYNRFTPY
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgctctcttctcctacaatgattcttcagccttacggactgcccgtctatccccagggt
gcccaatgttaccccagcctagtacagggaggccctgggcaggaggccggccccggcagt
ggtgaccccaccctcccacaggtctatgcccagcctccctcataccctccaccaggacaa
gctcctcccacacctgcaggcagacttcctcctctagactatagtcccgcccaccccaac
tcagagtaccaggagcatcaccagctcagagtctatcaggggccgcaacacgaaggggct
gacactctggcagccattagcacggacaatgccctggttccggtgacctctgactcccag
gctctgagcgtgtcagtgtcatcagggggtggagcaggaagtggtagcgatgaggagggg
tcaggcaaggcccagcccaagcgtctccacgtttccaacatccccttccgcttcagagac
ccggacctcagacagatgtttgggcaatttggcaagatcctggatgtggagattatcttt
aatgagagagggtcaaagggttttgggttcgtgacctttgagagcgcaatggaggcagac
cgagcaagggaaaaactgaacggaactatcgttgaggggaggaaggttgaggtaaacaat
gctacagccagaatagtcaccaagaaaccccaaacaccacttgtgaatggtgaagtttca
acccctggatggaagatcaaccctgtcatgggagcgatgtatgcacctgaactctacacc
ggtgagtttcaatttgccagtttcccctaccccgtagctgctcccaccctggcctatcgg
ggctcaccactgcgtgggcggggccgggctgtctacaacacaattcgctcagctgctgca
gtcccacccactgccatgcccgcctaccctggaatgtctcctttcagtgtgctgtaccaa
gatggattatatggagctgaagtctatggcgggtatcctgcagcgtacagagttgcccaa
tcaccatccgctgccacagcaacatacagtgatggatatggccgagtttatgctgctgca
acggatccctaccaccattcagtgggacccacggcaacatacggcgtcggaacaatggcc
agtctgtacagaggaggatacaaccgcttcaccccttactga
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