Oncorhynchus gorbuscha (pink salmon): 124007093
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Entry
124007093 CDS
T07892
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040
Spliceosome
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124007093
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124007093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124007093
Spliceosome [BR:
ogo03041
]
Common components
Common spliceosomal components
SR proteins
124007093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124007093
NCBI-ProteinID:
XP_046173343
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All DBs
Position
LG20:complement(45297531..45307021)
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AA seq
261 aa
AA seq
DB search
MSGDNMSGGGSVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGP
PFAFVEFEDPRDADDAVHGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGRGGGGDGGGAP
RGRYGPPSRRSEYRVIVSGLPSSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDM
TYAVRKLDNTKFRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSNGRSNGRSNSRSRSFSP
PRRSRPSPRYSPRHSRSRSRS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagataatatgtcgggcggcgggagcgtggttcgtggcccagcggggaacaac
gactgtcggatctacgtgggtaacctgccgcctgatattcgcactaaagacgtggaggat
gtgttttataagtacggggcgatccgagatatcgatctgaagaaccgcagaggaggacct
ccgttcgcttttgtggaattcgaggatcccagggatgctgatgatgcggtgcacggtcgt
gatggttatgactatgatggttaccgtctccgggtggagttcccccgtagtgggcgtggt
ggagggagagggggtggtggcggcggcaggggtggcggcggcgatggaggaggagcccca
agaggtcgatacggacctccctcacggcgctcagagtacagagtcatcgtctcaggtctc
ccctctagtggtagctggcaggacctaaaggaccacatgcgcgaggcaggtgatgtatgt
tacgctgacgtgttccgggacggtaccggcgtggtggagttcgtacgcaaggaggacatg
acctacgctgtccgcaagctggacaacaccaagttccgctcccacgagggagagactgcg
tatgtgcgtgtgaaggtggacggacctcgcagccccagttacggacgctcccgctctcgt
agccgtagcaacgggcgtagcaacgggcgtagcaacagccgttcgcgcagcttctcaccg
ccgcgacgcagccgtccctcgccacgctactcgccacgacactcccgatcacgctcccgc
agctag
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