Oncorhynchus gorbuscha (pink salmon): 124007727
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Entry
124007727 CDS
T07892
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124007727
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124007727
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-C3HC4_3
Fib_alpha
zf-RING_2
zf-RING_5
U-box
Y1_Tnp
Motif
Other DBs
NCBI-GeneID:
124007727
NCBI-ProteinID:
XP_046174406
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Position
LG21:26388572..26394562
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AA seq
556 aa
AA seq
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MAEQGVLLDQDQFCCSICLDLLKEPVTINCGHSYCSNCIEDCWDKDDPNGSYNCPQCRQT
FSPRPALMKNSLLAMVVGNMRKIGLQPTTPALCFAGPGDVECDFCNGRKQKALKSCLVCL
ASYCETHLQPHYNIAPLMKHKLIKATTQLQDNICSHHDKLLEIFCRTDQQCICYLCTMDE
HKGHDTVSITAEKMEKQKQIGLSQQRVKQRVQEREKELKEVQKAVESLSRSAQAAVEESE
RIFTELIDSVERRRSEMKELIVAQEYTAVSQAEGLMERLEQEIAELKMRGVELEKLAHTE
DHIHFLESYQSLASPSVFSDLPTITVRPLPHFEDVSEAVSNLREKLEGVLKREWCRISTR
VNLVDVLHPPEPKTRADFLQYSCRLTLDPHTLYRQLFLSELNRKVKLKRKGYSYPSRPDR
FTQLCQVLCREGLSGRCYWEVEWSGWKIYAGVSYKDISRSGPVDDCQFGHNDKSWSLECC
SNGYFFRHNNVKTEVARPQSSRVGVYLDHQAGTLSFYSVSDKMTLLHRVQTKFNQPLYPG
FWLHCFKTTAELCELE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcagggagttctcctggaccaagaccagttctgctgctctatctgtctggat
ttactgaaggagccggtcactatcaactgtggacacagttactgtagcaattgtattgag
gactgctgggataaggatgatccaaatggctcctacaactgtccccagtgcagacagact
ttctcgcctaggccggctctgatgaagaatagcttgctagccatggtggttgggaacatg
aggaagataggactccagcctactactcctgctctgtgctttgctggacctggagatgtg
gaatgtgatttctgcaatggaagaaagcagaaagctctcaagtcatgtctggtgtgtcta
gcctcttactgtgagactcatctccagcctcattataatatagctccattgatgaagcac
aagctgatcaaagccaccacacaattgcaggacaatatctgctctcatcatgacaaactg
ctggagattttctgccggaccgaccagcagtgtatctgttatctgtgtaccatggatgaa
cataaaggccatgatacagtctcaatcacagctgaaaagatggagaaacagaagcagatc
gggttgagtcagcagagggtcaagcagagagtccaggagagggagaaggagttgaaggaa
gtgcaaaaggctgtggagtctctcagtcgctctgcacaggcggcagtggaggaaagtgag
aggatcttcacagaattgattgactctgttgagcgaaggcgctctgagatgaaggagctg
atcgtagcccaggagtatacagctgtgagtcaagctgaaggcctcatggagcgtttggag
caggagattgctgagctgaagatgagaggggttgagctggagaagctcgcacacacagag
gatcacatccatttcctggagagttatcagtctcttgccagtcccagtgtattttcagat
ttgcccaccatcactgtccgtcctcttccgcactttgaggatgtgagcgaggctgtgtct
aacctgagagagaaactagagggcgtcttgaagagggaatggtgcagaatttccaccaga
gtgaatctagtagatgttctacaccctccagaacccaagaccagagccgacttcttacaa
tattcctgtcggctcaccctggacccacacacattatacagacaactctttctgtctgag
ctaaacagaaaggtgaaactgaagcgcaaaggctactcctaccccagccgtccagacaga
ttcactcagttgtgtcaggtgctgtgcagggaaggtctgtctgggcgctgttactgggag
gtggagtggagtgggtggaagatttatgcaggcgtctcatataaagacatcagccgatca
gggcctgtggacgattgtcaattcggacacaatgacaagtcctggagtttagagtgctgt
agtaatggttactttttccgacataataatgtcaagactgaagtggcacgccctcagtcc
tccagagtaggagtgtatcttgatcaccaggcgggcactctgtccttctacagtgtttcg
gacaaaatgaccctcttgcacagagtccagactaaattcaatcagcccctctatcctggg
ttttggcttcattgttttaagaccactgctgagctatgtgagctagagtag
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