Oncorhynchus gorbuscha (pink salmon): 124011639
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Entry
124011639 CDS
T07892
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121 isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124011639 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124011639 (pom121)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124011639 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
124011639
NCBI-ProteinID:
XP_046181054
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All DBs
Position
LG02:complement(84581414..84590202)
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AA seq
1170 aa
AA seq
DB search
MSPREKRFTAFSSLVFCSIVIFCLVVYYIPTFFYIVFILGVCCVACIYHSGESLNARLGP
HPRHGLTIPPVLRRWLPEIANGLPTAGRVRSRTVKGDVREPLVFTDQRRSESAIYRKVAG
QSDSFLFSPRDILMGSYIGKAESPPSVVGRPRADANLRVNPNAREQLREILARPNHAVYT
PNKRLSFGREPLGMMGRFTITPQRHYPLQQTGTSSVGILPPAQWDSFKKKNILTSRKSPA
VHSPVTVKIARPDRNTSQSPFFDHLNSPGILGSPDLGAPADPCSRETVLSMLKESRKREV
DNEDDRSFTAGQKSKRRRHDSSGSAHSAFEPLLPNGAPTQPVPKPGTLKRGLNAMTEESM
MKKSRTSSISSVSCGLTPSGTLGSVRNSIRSSLSSSQGFAQRKKASTRSLSPLSSPGSSR
SQTPERASKKPREEDARSPSSASSTRSDKTLMDPAPTTEKLTLAPEVHVASDSAGSGKRK
RKIPLVSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLEECVPEKSVPAPVV
TTSSQPPVSSDPTPTLATLLASPLSISTSASVVAPISVINLDPVPSSTAAPVTTTPAANP
LLESLKMMRNNSLASAAATTPAPAVSLVKVLMTPAPLVTSALQAETSLTAPQPTPASSFQ
PAPTSLSQPASTMSSAFIQVLSQVTKAPSSVPSLGGASLFGLANTLKAPSSSLAPTATTE
TTSSNNPLLASVFKPIFGPATPASPATESTPAVPTFKPIFGSATATSAFGQPAATSAPST
ASASASLLSGLTNSSTVAPAASLFTGVSSSTAPAPVPSAVPAAPPSVKSLFGNWSAPPAM
TSATTIAPATGSTFQFGSTTAPAPTLSSTAAATTSNNSFSFGAMTTTSAATQLAPPATAQ
GGFTFGQAAATQNSTTASFSGFGMATAVTTTAAAPAIQSTFTFGKSSFDASTASAFPSAT
QAPAAASAAANPFTFGSAGATPAPFAFGAAATTAASTFGTATKLAFGASSTGFAFGNTVA
VPAAPAFGSATQTAGTLPASAPTFSFGGVSAQQAPATPVQPTTGGFNFGAAISGTPFGTP
NLTTQTPGFNFGAAVSDKPAFGTSTPTFGQSTAAGPIAFGSPGTPVQGFSALAPSAFGSP
STPSFSIGAGSKTSGARQRLQARRQHPRKK
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaagagagaagcggttcacagcgtttagctctctcgtgttttgttctatcgta
atattctgtctagttgtgtattatattccaacctttttttatatagttttcattcttgga
gtttgttgcgttgcctgtatttatcacagcggagaatcactcaacgctaggttaggccct
catccacgccatggtctgactattccacccgtgctgcgacgctggttgccagagattgcg
aacggattacccacagcggggagagtcagaagtcgcacggtcaagggtgatgttagggaa
ccgctagtatttaccgaccaaagacgttccgagagcgctatttatcggaaagtcgcggga
caaagcgactcatttctgttcagtcctcgggatatactaatgggaagttacattgggaag
gcagaaagtcctccctcagttgttgggaggccgcgagccgatgcgaatttgcgtgttaac
ccaaacgcacgagaacaactgcgcgaaatattggcgcgacccaaccacgctgtttatact
ccgaacaaaagactgtcatttgggagggagccccttggcatgatgggcaggttcaccata
actccccaacgccactaccccctccagcagaccggcacatcctctgtgggcatcctgcca
cctgcccagtgggacagcttcaaaaagaagaacattctcacctctcgaaaatccccagca
gtccacagtccagtcacagtgaagattgctaggccagatcgcaacacttctcaatcccct
ttctttgatcatttgaactccccgggaatccttggttctccagacctgggggcccctgca
gacccttgctccagggagactgttctgagcatgctcaaagagagccgcaagagagaggtg
gacaatgaagatgacaggagcttcactgcagggcaaaagagcaaaaggaggcgtcatgac
agcagtgggagtgctcactcggcatttgagccactgctgcccaatggggctcctacacag
ccggtgcccaagcctggtacgctgaagcgaggactgaacgctatgactgaggagtcaatg
atgaagaagtcgcgcacctcttccatcagttctgtgagctgtggcctgacccccagcggc
accctgggctcggtccgcaactccatccgcagctccctcagctcctcacaaggctttgct
cagcggaaaaaggcctccacccgcagcctctcccctctctccagccctgggtcatcccgc
tcccagaccccagagagagcctctaaaaagcccagggaagaggatgctcgctcccccagc
tctgcatcctcgactaggtctgacaagaccttgatggacccagcacccaccactgaaaaa
ctgactctagccccagaggtccatgtggcgtcagactctgccggtagtgggaaacggaaa
cgcaagattccgctggtgtcgagtcgtagaggagaccaaatatctctacctccacctcct
gagctgggctacaccatcactgtgaaagacctggatcaggagaaaaaagctgctctcagc
cagatcaacacagtcctcgaagagtgtgtaccagagaaatctgtgccagctccagtagtg
accacatcttctcaacctcctgtgtcaagcgaccccacacccaccctggccaccctgctg
gccagccctctttccatatcgacatctgccagtgtggtggctcctatctctgtgatcaac
ctggatcctgtcccctcaagcacagctgcacctgtcaccaccacccccgcggccaaccct
ctcctggagtctcttaaaatgatgaggaacaactccctcgccagtgctgctgccaccact
ccagccccggctgtctccttggtgaaagtattgatgactcctgcaccactggtgacttct
gctctgcaggcagagaccagcttgactgctcctcagcccacaccagcttcttccttccag
cctgccccaacctccctctcccagcctgccagcaccatgtcctctgctttcatccaggtg
ctgagccaagtcaccaaggcccccagcagtgtccccagcctgggtggagctagcttgttt
ggcctggccaacacactgaaagccccttcctcctcactggcccccaccgccaccacagaa
acaacaagcagtaataatcccctcctggcctctgtgttcaagcccatcttcgggcctgcg
accccagcctccccagccacagagagcacacctgctgtcccaacctttaagcccatattt
ggaagtgccacagccaccagtgcttttggacagccagctgctacctcagccccctccaca
gccagcgcatctgcttcattgctcagcgggctcaccaacagcagtacagtggcccctgct
gcctccctgttcactggggtgtccagcagcaccgctcctgccccagtcccctccgcagtc
ccagccgccccgccatctgtcaagtctctgtttggaaactggagtgcgccgcctgcaatg
acctctgccacgaccattgcccctgccacaggaagtactttccagttcggctccaccaca
gctcctgcacccaccctcagctccactgcagccgccaccactagcaacaacagcttttcg
tttggtgccatgaccaccacctctgctgccactcaactcgcccccccagccaccgcccag
gggggatttacctttggccaggctgcagccacccaaaactctaccaccgcatccttcagt
ggctttggcatggccactgcagtcactactactgctgcagcacctgcaatccagtccacg
ttcacgtttgggaagtcatcattcgacgcctccacagcatcagcgttccctagcgcgact
caggccccggctgctgcttccgcagcagctaatcctttcacatttgggtcagctggggcc
acccctgcccccttcgcttttggtgcagctgccactacggcagcttctacatttgggacc
gccactaagctggcatttggagccagctctacaggttttgcatttggaaacactgtggct
gtcccagcagcccctgcctttggctctgccactcagactgccggcacactcccagcctct
gccccaaccttctcgtttggtggtgtgtctgcacagcaggcccccgctacccctgtccag
ccaaccaccggaggattcaacttcggcgcagcaatttcaggcactccgtttggaacaccc
aacctcacaacacagacaccaggcttcaacttcggggctgctgttagtgacaagccagcc
ttcgggacgtctacccctacttttggccagagcacagctgcaggtcctatcgcctttgga
agcccaggaactccagtccaaggattcagtgctttggcaccctcagcattcggttctcca
tcaactccctcgttctccattggtgctggctccaaaacatcaggggcacgccagaggcta
caggcccgaaggcagcaccccaggaagaaatag
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