KEGG   Oncorhynchus gorbuscha (pink salmon): 124014159
Entry
124014159         CDS       T07892                                 
Name
(RefSeq) ras-related protein Rab-39B-like
  KO
K07925  Ras-related protein Rab-39B
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124014159
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124014159
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:ogo04031]
    124014159
Membrane trafficking [BR:ogo04131]
 Autophagy
  Other autophagy associated proteins
   Rab GTPases
    124014159
GTP-binding proteins [BR:ogo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab39/42 [OT]
    124014159
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_22 TniB
Other DBs
NCBI-GeneID: 124014159
NCBI-ProteinID: XP_046184865
LinkDB
Position
LG25:21806063..21813276
AA seq 213 aa
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEPQRQVTRQEAEKLAGAYGMRYVETSARDAINVEHAFTELTRDIFQLVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq 642 nt   +upstreamnt  +downstreamnt
atggaggcgatatggttgtaccagttcagactcatcgtcattggggactcgacggtgggg
aaatcgtgcctgatccggcggttcacggagggaaggtttgcccaggtgagtgacccgacg
gtcggcgtggatttcttctctcgcctggtggagattgagccggggaaacgcatcaagctg
cagatctgggataccgcgggacaggagcgcttcaggtccatcaccagagcctactatcgt
aactcggtgggcgggctcctcctgtttgacatcacaaaccgccgttccttccagaatgtt
catgattggctagaggaggcccggagccacgtacaaccacacagcattgtgttcctattg
gtcggccacaagtgtgacctggaacctcagcgccaggtaactcgtcaggaggctgagaaa
ctcgccggcgcctacgggatgcgttacgtagaaacttcggcccgcgacgccataaacgtg
gagcacgccttcacggagctgaccagggacatctttcagctggtgaggagcggtgacatc
actatccaggagggctgggagggggtgaagagcggcttcgttcccaacgtggtccactcc
tccgaggaggtcaccaagagcgaccgacgctgcctctgctga

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