Oncorhynchus gorbuscha (pink salmon): 124015114
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Entry
124015114 CDS
T07892
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
124015114
NCBI-ProteinID:
XP_046186016
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Position
LG26:2848901..2878765
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AA seq
581 aa
AA seq
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MSSTLGNKDKDWKEKDLKGGPTGGKEKEKETKALAGLGGKDPKAKGKDAKEGKKDAGSAS
PAVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIKE
LTQLAELYLYSNKLQSLPSEVGCLSGLVTLALSENSLTSLPESLDSLKKLRMLDLRHNKL
REIPAVVYRVMSLTTLYLRFNRITAVERDIRNLAKLTMLSIRENKIKQLPAEIGELCNLI
TLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPR
SLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLN
MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDI
CGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN
QLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCS
KLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggtaacaaagacaaagactggaaagagaaggacctgaaaggaggt
ccgacaggagggaaagaaaaggaaaaagagaccaaggctctggctggtttaggcggcaag
gatcccaaggccaaagggaaagacgccaaagaaggaaagaaggatgcaggttccgcgtcg
cctgccgtcgccttctccgtggacaacacgataaagaggcccaacccggcgccggggaca
cgcaagaagtccagcaatgccgaggtgatcaaagagctcaacaagtgccgtgaggagaac
tccatgcgtctggacctgtccaagcgttccatccacatgttacccacctccatcaaggaa
ctcacccagctggcagagctctacctgtacagcaacaagctccagagcctcccctcagaa
gtgggctgcctgtctggcctggtcaccttagccctgagtgagaactctctaaccagcctc
ccagagtccttggactccctgaagaagttgaggatgctggacctgaggcataacaaactg
agggagataccggcggtggtttaccgggtgatgtcgctgaccacactgtacctgaggttc
aaccggatcacggcggtggagagggacatccggaacctggcgaagttgaccatgctcagc
atccgtgagaacaagatcaaacagctgcctgccgagataggggagctctgtaacctcatc
accctggacgtagctcataaccagctggaacatctacccaaggagatcggcaactgcacc
cagatcaccaacctggacctacagcacaacgagctactggacctaccagaaactataggt
aacttggcaagcataaaccgcttgggtctgcggtacaaccggttgtcagccatccccagg
tcgctagccaagtgcagagaactggaagagctcaacctagaaaacaacaacatctctgtg
ttaccagaaggtctcctgtctagtctggtgaatctgaccagtctaaccctggcgaggaac
tgtttccagtcctacccggtgggaggaccctcccagttctccaccatctactctctcaac
atggagcacaaccgcatcaacaagatcccctttggaatcttctccagggccaaagtcctc
agcaaactcaacatgaaggacaaccagttgacgtctctgcctctagactttggcacgtgg
accagtatggtggagctcaacctggccaccaatcagctgacaaagatccctgaggacatc
tgcggtctcgtctcgcttgaggtcttgatattgtccaacaatcttctcaagaagttgcca
catggtattggcaacctgaggaaactacgggagctcgacttggaggagaacaagctggaa
tcgctcccgaatgaaatcgcttacctgaaagatttacagaagctagtgttgaccaataat
cagctgaccacgttgccccgtgggatcggtcacctcaccaacctgacccacctgggtctg
ggagagaacctgctgcagcacctgccagaggagatcggtacactggagaacttggaggag
ctgtacctcaatgacaaccccaacctgcacagcctcccgtttgagctggccctgtgcagc
aagctgtccatcatgagcatcgagaactgtcctctcagccatctgcccccgcagattgtc
gccgggggcccctccttcattatccagttcctcaagatgcaggggccctacagggccatg
gtctga
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